NONHSAT012893
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT012893 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1185 nt |
Genomic location |
chr10-:43016388..43047739 |
Exon number |
5 |
Exons |
43016388..43016575,43018658..43018753,43019060..43019186,43046005..43046063,43047025..43047739 |
Genome context |
|
Sequence |
000001 TGTCCTCGCA GGTCGCAGCT TCATGGCCTG ATGCCTTCAG GAAGTATTTT GAAGTCATCG TGGCTGTGGA TTGGGGGATT 000080
000081 TCTTGTTTCC ACTGACCTGT GAGGCCGCGC ACGTGGAGGG AGGCACCCCG GGTCCTCCGG CACTGTCCGG CCTCGCCTGT 000160 000161 GTCCCTAGTA GCAGTGGGCA TTTCCAGACG GTGCAGCTTG TGGCTAAAGT GACAGGAAGA TGTAGGAGCT TTCAGTCTTG 000240 000241 GATGAGGATT CGAACTGAAG GGCTTAGGCC CAGCTGTCTT GGAGCAAAAC ATCTGTTGTG GGGTGAGAAG GGAAAGGAGG 000320 000321 GGTGAGGGTG CAGGGGCCCT CCTAGGAGGA CATCGGACCT GTTGGGCCGA GACCTCATTA GAGATCTAGA GCACGGATGG 000400 000401 GAGGAGCAGA GGCTCGATTT GTGTCCTGTT CAGACTCCCA CAGGCTGGGT GATGGTGGGA GATTTGTGCC CATTCAGATG 000480 000481 TGGCGGCAGA GGAGGGCAAG GCCGAAGGAG CAGACAGCAC CGCTTCTTGG GGAGTTGTGA AGGCATCATG CGGAGGGCCG 000560 000561 AGCTTAGCAG CCAAGTGGAG GACAGCACCC TCCATGCCTG GATTCGTTAC TCGCTCGTTC TCGATGTTGA GCTGCTGGCA 000640 000641 TATTGCAGCA CAACTAGAGA TGTACGGATG CCCCCATCTT GATCTTACAG AATCAGAGGT GCAGCCGCAA GAAAGCTACA 000720 000721 CCCTCTCGGT TTTCTCTGCT CTGCCAACAC TAGTGGAATA TGATCACATC CCAGGGATCA GTGTCATTTA GGGATGTGAC 000800 000801 TATGGGCTTC ACTCAAGAGG AGTGGCATCA TCTGGACCCT GCTCAGAGGA CCCTGTAGAG GAATGTGATG CTGGAGAACT 000880 000881 ACAGCCACCT TGTCTCAGTA GGGTATTGCA TTCCTAAACC AGAAGTGATC CTCAAATTGG AGACAGGCAA GGAGCCATGG 000960 000961 ATATTAGAGG AAAAATTTCG AAGCCAGAGT CATCTGGAAT TAATTAATAC CAGTAGAAAC TATTCAAGAA TGAAGTTCAA 001040 001041 TGAGTTTAAC AAAGGTGGAA AATGTTTCTG TGATGAAAGC ATGAAATAAT TCATTTTGAA GAGGAACCTT CTGAATATAA 001120 001121 TAACAATGGG AACAGCTTCT GGCTGAATGA AGACCTCATT TGGCATCAGA AGATTAAAAA TTGGG |
Predicted Small Protein
Name | NONHSAT012893_smProtein_593:790 |
Length | 66 |
Molecular weight | 7274.2622 |
Aromaticity | 0.107692307692 |
Instability index | 77.4738461538 |
Isoelectric point | 4.47186279297 |
Runs | 11 |
Runs residual | 0.0189423076923 |
Runs probability | 0.0374411845 |
Amino acid sequence | MPGFVTRSFSMLSCWHIAAQLEMYGCPHLDLTESEVQPQESYTLSVFSALPTLVEYDHIP GISVI |
Secondary structure | LLLEEEELLLHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLEEEEEEELLLLLEELLLLLL LLEEL |
PRMN | - |
PiMo | - |