NONHSAT012922
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT012922 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
926 nt |
Genomic location |
chr10-:43169261..43187198 |
Exon number |
4 |
Exons |
43169261..43169805,43178806..43178908,43181399..43181464,43186987..43187198 |
Genome context |
|
Sequence |
000001 gctgcgacga cagcgactga agcgcagctg gagtggtaag atggcggacg agcagctgca gcagctccgt gcggtgctac 000080
000081 agggggaggg gaaggtggtt tctcctgaca caagctggag gccggagcct gtggcaccct ggcttgcctc actgaagctg 000160 000161 gtggctgtga cagggactgc acggctgctg gagtggtaga aaggcagccc agGAAGCCAT CATTCTGTAG AAGGCAGTGA 000240 000241 CGGAACAGTA CCAGCAGAAA TTGAAGGACC AGCAGAAGGG ATCATGGCCA AAGTTGCAGT GTCCCCCCGC TCGTTGAAGA 000320 000321 TGAGGAGTTC TCAGAGAGCG GGATGTTTGT GACATTCCTC ATGTCAGCTC TCGAGTCCAT Gactctcact cggtcgtcca 000400 000401 ggctggagtg cagtggcacc atcttggctc attgcaacat ctggctccca ggttcaatcg attcttctgc ctcagccttc 000480 000481 tgagtagctg gaattaacag gtgtatgcca acttatctgg ctaattttgt tgtgtatttt tctttcagta cagactgggt 000560 000561 ttcaccatgt tggccatgct ggtcttgagc tcctcacctc aggtgatcca catgcctcag cctcctaaag tgctgggatt 000640 000641 ataggcgtca gccaccgctt ctggcctaga tcattaacat atcactatga tactaaaatt ccctctgcca aagaaaatct 000720 000721 tgccattttg tgacatgagt tgtataaaga tgtatgttta tatgcactga acctgtgcac ctagagttcc accctgctca 000800 000801 tgctaacgtt gttctccctc cccgtaccta gttcttaaaa actccatgcc ttccattttt cagggaaagg gtgtctttag 000880 000881 agcaagaact cttttcttct ccatcccagg cagggaaaaa acccac |
Predicted Small Protein
Name | NONHSAT012922_smProtein_686:769 |
Length | 28 |
Molecular weight | 3291.1945 |
Aromaticity | 0.148148148148 |
Instability index | 134.018518519 |
Isoelectric point | 9.18524169922 |
Runs | 6 |
Runs residual | 0.0155662909286 |
Runs probability | 0.0334010481069 |
Amino acid sequence | MILKFPLPKKILPFCDMSCIKMYVYMH |
Secondary structure | LEELLLLLLLLLLLLLLHHHHHHHEEL |
PRMN | - |
PiMo | - |