NONHSAT013291
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT013291 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1403 nt |
Genomic location |
chr10+:50329703..50359313 |
Exon number |
4 |
Exons |
50329703..50330321,50343922..50344126,50349298..50349412,50358850..50359313 |
Genome context |
|
Sequence |
000001 gcgtgagcca ccatgcccag ccctcaacat acgaattttg agaggacaca atttaaccca ttacTGAGCA CCACAGAAAT 000080
000081 TCTCATGAAA GGTCTGTCAG GACTCCACCA TTTTGACATG ACCCTCGTTT TCCCCCACAA TCCCCCTTCC AGGACCCCAT 000160 000161 TGTGATGTCA CATTTCAGGT CAAAGCATTA CATGTTATTC TTAACACCTG CCACTTCTCT CTTCCCACCT CTATCTGCCT 000240 000241 TATTGAACTT CATCTTTCCT TCATTCTCTT CAACTTCCAC TTCTTCTTGT ATGGTCCTGT TGATGCCATC TTGTTTCCGT 000320 000321 CCCCAGACTC ATCATCTTTA CCCTCTGTCA ACTGAGTTCC CACCCTGGTT CTCTCTCAAG ATCTTCCTCT CATAGCTTTC 000400 000401 ACCCTTGGTA AACAATGAGG ACACATCTCA AAAAGAATGA TGTAATTTAA TTGCCTTGAG TTGGCTGGGC CATCATCTAT 000480 000481 TATAAAGTGC TCTTAAAATT AAAGCTAATT TAATTCTGAA GAACTAAGGA TTAAGAAGTT AAGAGCTGGG GTTCTTACAA 000560 000561 TATGGCTTGC AGACTACAAG TGTGAACTGA GGAGGTCCCC AAAGTCACTT CTTACTAAGT TCAGATAGGT GATGGATTGA 000640 000641 AAATAATCCC AATATTCCAC AAGCAACATC AACATCCCCC ACACACCCAG CACCGAGGAA TACCCTCCTC TCTAGAATGT 000720 000721 GAGGCCACTG TGTGGAGGAA GACACCACGG TGCTCTACTG AGCCATGAAA GTCACGCCTG ACCTAAACAG AAGACTACGT 000800 000801 CCCCTGGCTA AAAGAGGAAA TAGTtgaaag cggtgtaaat ggctcttatc tgaaccacaa tgaattcaca tattcaagtt 000880 000881 ggcttcttcg gaaatttcag gccacaaatg gcagtgatgc gaccaggagc agtaacacgT GCCACTTCCA TCCGGACAGA 000960 000961 AGGAACCCAG GTCAAGGCTG ACAGGAGGAG CAGGAGCCGT CAATGAGAGC AGACCTCAGA AGCCAACGGA GGTGAGAAGA 001040 001041 GCACCATCCA CAGCCCCATC CTCTGAATGC TGTGGGAAGA AGTCCACAAA ATACCACCCC TTGGAGTCAG TCAGTAGTAG 001120 001121 AGCCCTTGCT GCTGGCTGCA AATACCCCAT CAGAACATGT TTGGGGTGAT TCTTGGACCT GGTTTCAATT TCTTTTCTGC 001200 001201 CAGTCAGCAG TTGTGCTTGA CTCACAATTT GTTGCCATCT CTTGAATTAA ACTCAGGAAA CAGGATAAAG ATCAGAACCA 001280 001281 CATTGTAAAA GCTTCCTTAT GGTTCATTTT TTGCTGAGAT AAATAATGAG CAGCTCTGAT CCATGTCTCT GGAGAGCTCA 001360 001361 GAGCACACTA CCAGGAGCTC CTAGCCACAG GGTGAGCACA GGT |
Predicted Small Protein
Name | NONHSAT013291_smProtein_164:394 |
Length | 77 |
Molecular weight | 8747.234 |
Aromaticity | 0.171052631579 |
Instability index | 80.2578947368 |
Isoelectric point | 9.30230712891 |
Runs | 11 |
Runs residual | 0.00332728372656 |
Runs probability | 0.0697756580109 |
Amino acid sequence | MSHFRSKHYMLFLTPATSLFPPLSALLNFIFPSFSSTSTSSCMVLLMPSCFRPQTHHLYP LSTEFPPWFSLKIFLS |
Secondary structure | LLLLLLLEEEEEELLLLLLLLLHHHHHHHHLLLLLLLLLLLLEEEELLLLLLLLLLEELL LLLLLLLLLEEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooooooooooooo oooooooooooooooo |