NONHSAT013346
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT013346 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
604 nt |
Genomic location |
chr10+:51549553..51562493 |
Exon number |
5 |
Exons |
51549553..51549587,51550041..51550174,51555731..51555836,51556751..51556856,51562271..51562493 |
Genome context |
|
Sequence |
000001 GTACCTGTCT ATAAGGAGTC CTGCTTATCA CAATGgggct cccaaacttg gctgtgcagt ggaaactccg ggggaatttt 000080
000081 gaagaacact gacacccatc ttccaccccg acactctgat ttaattgggc tgcagtgaga acagagcatc aatttaaaaa 000160 000161 gctgcccagA ATGTTCTCCT GGGCAGCGTT GTGATCTTTG CCACCTTCGT GACTTTATGC AATGCATCAT GCTATTTCAT 000240 000241 ACCTAATGAG GGAGTTCCAG GAGATTCAAC CAGGAAATGC ATGGATCTCA AAGGAAACAA ACACCCAATA AACTCGGAGT 000320 000321 GGCAGACTGA CAACTGTGAG ACATGCACTT GCTACGAAAC AGAAATTTCA TGTTGCACCC TTGTTTCTAC ACCTGTGGGT 000400 000401 TATGACAAAG ACAACTGCCA AAGAATCTTC AAGAAGGAGG ACTGCAAGTA TATCGTGGTG GAGAAGAAGG ACCCAAAAAA 000480 000481 GACCTGTTCT GTCAGTGAAT GGATAATCTA ATGTGCTTCT AGTAGGCACA GGGCTCCCAG GCCAGGCCTC ATTCTCCTCT 000560 000561 GGCCTCTAAT AGTCAATGAT TGTGTAGCCA TGcctatcag taaa |
Predicted Small Protein
Name | NONHSAT013346_smProtein_401:505 |
Length | 35 |
Molecular weight | 4032.5992 |
Aromaticity | 0.0588235294118 |
Instability index | 107.520588235 |
Isoelectric point | 12.401550293 |
Runs | 6 |
Runs residual | 0.00967982129561 |
Runs probability | 0.0324883707237 |
Amino acid sequence | MTKTTAKESSRRRTASISWWRRRTQKRPVLSVNG |
Secondary structure | LLLLLLLLLLLLEEEEEEHHHHHHLLLLEEEELL |
PRMN | - |
PiMo | - |