NONHSAT013520
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT013520 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
725 nt |
Genomic location |
chr10-:61060466..61083866 |
Exon number |
3 |
Exons |
61060466..61061007,61062561..61062624,61083748..61083866 |
Genome context |
|
Sequence |
000001 GAGACAGAGC ATGTGGTATC CAGCCAGTCA GAGTGTCAGG TGAGAGCAGG AACACCAGCT CATGAGAGTC CACAAAACAA 000080
000081 TGCCTTCAAG TGCCAAGAAA CAGTGCGACT TCAACCAAGA ATAGACCAGA GGACTGCCAT TTCGCCAAAG GATGCTTTTG 000160 000161 AAACTCGGCA GGACTTAAAT GAGGGGGTGA ACTATATAGA TTGACCCACA TTCTTTCACA CAGTTTCTGT TATGGCCAAA 000240 000241 ATTTGGGAGA CCAGAAAAGA CCTTGGGGAA ACTTGAAGGA CGTGCAATAT GAATGGGACA GAGATCATCA AAGAGGGTGG 000320 000321 ATGTGTTCAC ACTCATGGAT TGAAATGTCC TGTATCATTC CCAGCATTTC TCAACTTATT GAACACCAAA CTCTTTTATG 000400 000401 GAAGAACCAC CTAATAACAT TTCTTTAGGC GACAGAGTCT CTATGGAACA CAAATGGGAA ACATTGCTAT Atttttaatg 000480 000481 gggatagaaa atacatacag aaaagtgcac aggtcatagg tatacagctg aatgaattct tacaaagtgt gcaaccagca 000560 000561 cataaatcaa gaaacaaaat attaccagca tcccagatgc ctctttgtaa ttccttccag tcgctactct cctatgaaga 000640 000641 taactagtat tttttagtgt tttattcatg gattacatat gctcttttgt gtctggcttc gtttgctcca tattatattc 000720 000721 atgag |
Predicted Small Protein
Name | NONHSAT013520_smProtein_320:427 |
Length | 36 |
Molecular weight | 4153.909 |
Aromaticity | 0.0857142857143 |
Instability index | 75.0114285714 |
Isoelectric point | 6.21258544922 |
Runs | 6 |
Runs residual | 0.00968523002421 |
Runs probability | 0.0127333215568 |
Amino acid sequence | MCSHSWIEMSCIIPSISQLIEHQTLLWKNHLITFL |
Secondary structure | LLLLLLEEHHHHLLHHHHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |