NONHSAT013600
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT013600 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
2340 nt |
Genomic location |
chr10-:65005260..65007599 |
Exon number |
1 |
Exons |
65005260..65007599 |
Genome context |
|
Sequence |
000001 ATGCATTTGA GTATGATTCA TATAGAATTC AGTAGTAAAG TCATTAGATC CTGGACTTTT CTTTGGAAAA GAAATGGGAA 000080
000081 AAGATGCAAG GTTTTTGTTT CTTTTTTTTT TTTTTTTTTT GGCTCTGTCA CCCAGGCTGG TGTGCGGTGG CTCAGTCTTG 000160 000161 GCTCACTGCA GTCTTCGCCT CTCTGGCCCA AGCAATTCTC CTGCCTCAAC CTCCAAGTAG CTGGGACTAC AGGCATGCAC 000240 000241 AACCATACAT TTTGTATGTT TTGTAGAGGC AGGGTTTCAC CATGTTGGCC AGGCTGGTCT TGAACTCCTG GGCTCAAGTG 000320 000321 ATCCACCTTC TTTGTCCTTT CAAAGTGTTG GGATTACAGG TTTGAGCCAC CATGCCTGGC TGGGAGATTT TTAATTAAGG 000400 000401 CTTTGATTCC ATTATTTGTT ACTGGTTTGT TGAGGTTTTC TTTTCTTTCC TGGTTCAATT TTGGTAGGTT GTGTGTCCAT 000480 000481 GAATTTATCC ATTTTTCTGG GTTTTTCAAT TTGTTAGCTT GTATAGTTGT TGATAGTAGT CTCTAATGAG TCTTTGTATT 000560 000561 TCTGAGGTCT CAGCTATATC TTTTTTTTCC ATTTCTAATT TATTTGGGTC TTCTCCTTTT TTTCCTCAGT CTAGCTAAAT 000640 000641 ATTTATTGAT TTTATCTATC TTTTCAAAAT CCAGCTTTTC ATTTTTTTAA AATTTTCTTC TGTTTTTTGT TTTTTTGTTT 000720 000721 TTGTTTTTGT TTTTTTTGTC TCAGTTTATT TCCGTTCTCA CTTTTATTAT GTCCCTCTTA CTACTAATTT TGGATTTAGT 000800 000801 TTGTTCTTTT GTAGTTCCTT GGAGTGCATT GTTGCGTTGT ATATTTGAAG TCTACTTTTT AAATATAGAT GTTTATTGCT 000880 000881 GTAAACTTTC CTCTTAGTAT CGCTTTTGCC AAATCCCGTA GATTTTGTGT TTGGTTTTCA TTTTTTTCAA GAAATTAAAA 000960 000961 AAAATTTAAT TAAGTTTCTT TATTGACCTA TTCGTTGTTC AGGAGCATGT TGTTTAATTT CCATGTATTT GTGTGTTTTC 001040 001041 AGAGGTTTCC CTTGCTACTG ATTTCTAGGT TTATTCTGTT GTGGTCAGAA AAGACAGTTT GCCGTATGAT TTTCGCTTTT 001120 001121 TTGAATTTGT TGAGGCTTGT TTCATGGCAT TGTATTGTCT GTGTATTTGA TTTTACCAGT AGCTTTTATA TTTTTAAATA 001200 001201 TTTTCTTTTT TGTACATTAT TTGTTTTTCT TTCTGATTGA AGAACTTATA TCTTACATTC CTGTAAGATG AGTCTGGTGG 001280 001281 TGATAAATTC TCTCAGGTTT TGTTTCTTAG GAAAAAAAAA TTCTCTCTCC ATTTTATTTG AAGTATAGCT TTGCTAGAGA 001360 001361 CAGTATTCTT GCATGTCAGT GTTTTTGTTT TGTTTTGTTT TTTATTTTTA TTTTCATCAC TTTGAAAATG TTGTCGCCCT 001440 001441 CCCTTCTTAC CTGTATGATT TCCATTGAGA AGTCTGTTGG GAGCCAAATT GAATCTCTAT GTTTTTACTT TTCTCATGCT 001520 001521 TCTTTTAGGA TCCTCTCTTC GTTTTTGACC TTTTGAGAGT CTGATTATTA TATATGCCTT GGGGTAGTCT TATTTGGGTC 001600 001601 ACATCTGTTT GGTATGTCTG ACCTTCCTTT ACCTGGATTT TATCTCCTTC TCAAGTTTTG AAAAGTTTTC TGTTATTATT 001680 001681 GCTTTCCACT TTCTGCTGTT TCTCCACTTC CTCTTAAATA CCAATAATTC TTAGATTTGG TCTTTTTAGG TAATTTTGTA 001760 001761 TATGTCTTTT AGGTTATCTT CATTTCTTTT CATTGTTGTT TTTTTCTTCT CTGACAGGAT TCTTAAATAG CCTATCTTTG 001840 001841 AGCTCACTGA TTCTTTCCTC TCTTCATTCT GTTGTTGAAA GTCTCTGATA TGTTTGCATG TGTCCCCACC CAAATCTCAT 001920 001921 CTTGAATTGT AACTCCCACA GTTCCCACAT GTCCTGGGAG GGTCCCAGTG GGAGGTGATT GAATCACTGG AGTGTGTCTG 002000 002001 TTCTTGTGAT AGTGAATAAG TCTCACGAGA TCTGATGGCT TTAAAGAGAG GAGTTCCCGG CCGGGCTGGT GGCTCACGCC 002080 002081 TGTAATCCCA GCACTTTGGG AGGCCAAGGC AGGAGGATCA CCTGAGGTCA AGAGTTCGAG ACCAGCCTGG CCAACATGGT 002160 002161 GAAACCTCCT CTCTACTAAA AATACAAAAA TTAGCCAGGC GTGGTGGCAG GTGCCTGTAA TCCCAGCTAC TTGGGAGGCT 002240 002241 GAGGCAGGAG AATTGCTTGA ACCTGGGAGG CAGAGATTGC AGTGAGCTGA GATCCCGCCA CTGCAGTCCA GCCTGGGGGA 002320 002321 CAAGAGCAAG ACTTCATCTC |
Predicted Small Protein
Name | NONHSAT013600_smProtein_83:265 |
Length | 61 |
Molecular weight | 7066.2095 |
Aromaticity | 0.266666666667 |
Instability index | 56.305 |
Isoelectric point | 6.67694091797 |
Runs | 7 |
Runs residual | 0.0330673758865 |
Runs probability | 0.0350518585813 |
Amino acid sequence | MQGFCFFFFFFFWLCHPGWCAVAQSWLTAVFASLAQAILLPQPPSSWDYRHAQPYILYVL |
Secondary structure | LLLLHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLEEEEEL |
PRMN | LLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | ooooooTTTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiiiii |