NONHSAT013912
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT013912 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
902 nt |
Genomic location |
chr10-:73963200..73976015 |
Exon number |
5 |
Exons |
73963200..73963282,73970490..73970589,73971946..73972043,73972945..73973089,73975540..73976015 |
Genome context |
|
Sequence |
000001 AGCAGTCTCC TGTTTCTCCT CCTACCTTCT CCATTTTTCT AGTCCCTGCA GGTAGGATCC TGGGGGTTAA CTCCCTTTTC 000080
000081 ACCAAGCTCC CGAGGGCCCT CGACCCCTCG GCCTCTTACC TCAGCGGCTT TAGCACTTTC CCCTACAGCC CCACCCCCAG 000160 000161 GACCAGCCTG AGTGGCTGCG CTCACCACGA CGAGGACCGC GGCGTGTTCG CCCCCCAACA GACGGAGCCA GCGGCGAAGG 000240 000241 CGGCGTGCGC GCGCCCGTGC CGTGGTGGGC GTGGCCGGGG CGGAGACGCG AGGAGGGGAG CAGAGAACGC GCTCGCGTAG 000320 000321 AGGAATTCCG GGTCCTCCTC CTCGCCCTAC CTTGGTTTAC CTGCAGCCGC CTAGTCCTCT TCTCCTTCTC TTTGATGATT 000400 000401 CAGGGCCTCG GCTTCCCTCA CGATATTGCA GAAAGACACA GCTTTCCTCT TCCTCTCCAA ACCACCTCGA AGCAGGGGCA 000480 000481 TAATTGGAAT ATCATTTGGA GAAAGTGTCA TGGAAGTTCT GCGTCCACAG CTTATAAGAA TTGATGGCCG GAATTACAGG 000560 000561 AAGAATCCAG TCCAAGAACA GACCTATCAA CATGAAGAAG ATGAAGAGGA CTTCTATCAA Ggctggagtg cagtggcgtg 000640 000641 atctgggctc tctgcaacct ctacctcccg ggttcaagca attctcctgc ctcatcttcc ccagtagctg gaactacagG 000720 000721 CTCCATGGAG TGTGCTGATG AGCCCTGTGA TGCCTACGAG GTGGAGCAGA CCCCACAAGG ATTCCGGTCT ACTTTGAGGG 000800 000801 CCCCCAGCTT GCTCTATAAG CATATAGTTG GAAAGAGAGG GGACACTAGG AAGAAAATAG AAATGGAGAC CAAAACTTCT 000880 000881 ATTAGCATTC CTAAACCTGG AC |
Predicted Small Protein
Name | NONHSAT013912_smProtein_509:640 |
Length | 44 |
Molecular weight | 5239.6598 |
Aromaticity | 0.116279069767 |
Instability index | 67.7281395349 |
Isoelectric point | 4.63885498047 |
Runs | 7 |
Runs residual | 0.0054873268879 |
Runs probability | 0.0464708405885 |
Amino acid sequence | MEVLRPQLIRIDGRNYRKNPVQEQTYQHEEDEEDFYQGWSAVA |
Secondary structure | LEELLLLEEEELLLLLLLLLLLLLLLLLLLLHHHHHLLLLLLL |
PRMN | - |
PiMo | - |