NONHSAT015512
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT015512 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1315 nt |
Genomic location |
chr10+:91190696..91215865 |
Exon number |
2 |
Exons |
91190696..91191971,91215827..91215865 |
Genome context |
|
Sequence |
000001 GCAAAGTGCT ATTCCAAACA GATATAACTT CATCTTAACT TTGACATTTT ACAGATACCT TCCAAttttt tttttttgag 000080
000081 atggagtctt gctctgtcgc ccagggtgga gtgcagtggc atgattttgg ctcactgcaa cctccacctc ctgggttcaa 000160 000161 gcgattgtcc ggcctcagcc tcatgagtag ctgggactac aggcgcccgc caccacgcct ggctaatttt ttgcattttt 000240 000241 agtagagacg gagtttcacg atgttagcca ggatggtctt gatctcctga cctcatgatc cacccgcctc agcctcccaa 000320 000321 agtgctggga ttacaggcgt gagcgaccat gcccagtcCC AAATATTTTT AAAATTGCAA ATGACAAAGT CAATGGGGTT 000400 000401 CAAAACTAAA TTCTTAAACT AAGTAAGGAG ATAACAGACA ACATTTAAAT TTGTCTTTGG AAAACAACTA TGAAATATTA 000480 000481 CCATTTTCTC CTATCAGATC AAGTCAGTAT TTCATTCTGA AAGCAATGTA TTAACATGTG ATTTTATGAA ATAATCAAGG 000560 000561 TATAGGCAAG CTCTCTTGCG GAGCATACAC ATTAACTCAG GATCATCCTC ATTGCTGTTT TTTTTCCCCC AGCACTTGTG 000640 000641 AGGCCTTGTA GGGGACAGTG GATTAAATAG CCTTCAGGGT CAAAACAGTT CCTTGACATT TGGATTTTAA ACTCCTGGTA 000720 000721 ATTAAAATTG ATTGCATAAT TTACTCCTAT TACAGGTGTG ACACACTGTG AGATTCAGGA TTATAATTCT TTGGACTTAA 000800 000801 AATGGTTGGA AACAAGCTGG GGGATCTGGA CTTTTTCTTC CCTCCATGCC TTCCCTCTTC AATCTGAAGA CTCAGAAATT 000880 000881 ATCCCAAACC ATAGAAAAGT GGAGTATTTG AGAATGAATA AACTTATAAT CCAATGAGTA GATTTCTAAT TATTATCTAT 000960 000961 AAAGAGATGA AGAGCAGTGG ATAGTGGAAC AAGAATTAAC ACAGGGAGAA AGGAATCTCA CCTTTAGAAT ATCTCTAGGA 001040 001041 TAATATTTTT CAGACAACTG ACTCCCTCCA ATCCTCTTTT GGGTAATGAT AAAACTAAAT GTCTGATCTG CAAAGAAAAC 001120 001121 TCTCACCAGA GACCTGCTGA TTCAAGAATT CAGTTCCTGC CCAATTGGAA TACTGCCAAC ATTTTTCCAA CCTAACAGGA 001200 001201 ATGCGTCTGC AGTCTAAGTA AGAGCTTCTT CTCTGAAGGT AAAAGACGGG AAGTTTTGGT GTTGTTGACA TTTCAGTGAG 001280 001281 TGCTGCCAAC ATCTGGCATA CTAGAATTGA TCTAC |
Predicted Small Protein
Name | NONHSAT015512_smProtein_80:241 |
Length | 54 |
Molecular weight | 5986.7785 |
Aromaticity | 0.132075471698 |
Instability index | 73.2 |
Isoelectric point | 9.29925537109 |
Runs | 11 |
Runs residual | 0.047284859641 |
Runs probability | 0.0304555892791 |
Amino acid sequence | MESCSVAQGGVQWHDFGSLQPPPPGFKRLSGLSLMSSWDYRRPPPRLANFLHF |
Secondary structure | LLEEEELLLLEEEELLLLLLLLLLLLEELLLLEEEELLLLLLLLHHHHLLLLL |
PRMN | - |
PiMo | - |