NONHSAT016121
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT016121 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1464 nt |
Genomic location |
chr10+:104209577..104216046 |
Exon number |
2 |
Exons |
104209577..104210087,104215094..104216046 |
Genome context |
|
Sequence |
000001 tttttttttt tttttttgta gagacagggt ttcgccatgt tgcctaggct ggtctccaac ctggtctcct gggctcaagc 000080
000081 gatccgcccg cctcggcctc ccacagtgct gggattccag gcgtgagcta ccgcgcccgg ccTATTTACT TTTCTTACTA 000160 000161 AGCTGGGGAT CACCGTCGCC CTCGGCTTGG CAGGAAGGCG GGGGTAGGGG AGCGGTGGGA AAGGGGGGTG GGCGACGACT 000240 000241 CTGATAGAGG GAAAAGAGGA AGGGAAAGTT GGGGCTTACT GCAGGGCAAG CTCCTTAGGA GAAGGTGGGG AGGAGGAAGG 000320 000321 AGGGAGGTCC AGGCCCTTCT TCCATCCCAC GTCCTCCACT TCCCAAGGTG CAAGAAGAAA AGAGGTACAG AACACCCAGA 000400 000401 GGTGCCCTCG ATTCCGTCTT GCACTTGCCC TTCTCCCACC GTCCAGCAAT AAAGCGAGAG AAACAAGTGC AGGAAACTGG 000480 000481 CCGGCAGTCA TGGGAGAAGC CAAAAAGACA Ggagttcagt ggcatgacca gggctcactg caaccttgat ctgggctcaa 000560 000561 gtgatcctcc tacctcagct tcctgagtag ctaggaccac aggtgtgcac caaccacacc cgactaattt ttgtagagat 000640 000641 gagatcccac tatgttaccc aggctggtct tgaactcctg ggctcaggtg atcatcctgc cttggcttcc caaagtactg 000720 000721 ggattatagg cttgagccac cgtgcctggc cTGTGATCAG AATTCTCATT TTTTTAGTCA CTAAaaatgc tggggggcac 000800 000801 tccattctcc attatgtgat tagttcacat tgcatgcttg tatcaaaaca tcatatatac cccacaaata tatacaAAAA 000880 000881 ACTTTAAAAT TTTAAGTATT AATTGCTCAG GAAAAAATTA AAATGCTGGG GTGCTGAAAT CTCAAGGGCC CCATTACAAA 000960 000961 ACTCCTTAGG AACCTCGCCC TCTCTCTGCT GTAAGGACTG GTTCCAGAAT GAGAGAATTT AAAAGACATT Ccccccccaa 001040 001041 aatgttcata atgtcacccc ggaaacctgc gaatatgtta tattacatga ccagggagaa gtaaggttgc agatggcagt 001120 001121 aaggttgcta atgggctgac cttaagataa ggagatgatc ctggattatc tgggtggacc caatgtaatc acaagggtcc 001200 001201 ttaactgtgg aatagtgagg tggctgagtc agaggcagag tgatgcaatg actgaaagac ttaaccagcc atcaccggct 001280 001281 ttgaatacgg aagacggtca tgagccaggg aatgcaggca ggctctggga gctgaaaaaa gcaagaaaat ggattctccc 001360 001361 ctggagcctc cagaagggat gcggtcctgc caaccccttg tcagtgagcc atttcagatt tctgacttcc aggactgtaa 001440 001441 gaaaataaac ttgtcttgtt ttca |
Predicted Small Protein
Name | NONHSAT016121_smProtein_1154:1447 |
Length | 98 |
Molecular weight | 10981.559 |
Aromaticity | 0.0721649484536 |
Instability index | 52.7206185567 |
Isoelectric point | 10.2792358398 |
Runs | 15 |
Runs residual | 0.0231004200076 |
Runs probability | 0.0424130012365 |
Amino acid sequence | MILDYLGGPNVITRVLNCGIVRWLSQRQSDAMTERLNQPSPALNTEDGHEPGNAGRLWEL KKARKWILPWSLQKGCGPANPLSVSHFRFLTSRTVRK |
Secondary structure | LEEELLLLLLEEEEELLLLEEEELLLLHHHHHHHHHLLLLLLLLLLLLLLLLLLLHHHHH HHHHHHHLLHHHHLLLLLLLLLLLLEEEEEEEEEEEL |
PRMN | - |
PiMo | - |