NONHSAT016916
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT016916 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
857 nt |
Genomic location |
chr10-:127477151..127484759 |
Exon number |
4 |
Exons |
127477151..127477574,127477852..127478097,127483449..127483547,127484672..127484759 |
Genome context |
|
Sequence |
000001 AGGGATTGCC ATGGAAAGCA TAACTGTGTA TCAGACAGTT GCACACCCAG GAATCCAAGG GAACCTGAAC AGCTACTATT 000080
000081 CCCAGCAGGG GGTTCCAGCC AGCATCACAT TTTTTAGTCC CTCTGGCCTC ACATACAGTC TCAAGCACAT TCAGGAGTTA 000160 000161 TCTGGTGACA ATATCGATCA AATTAAGatg aggagatgga ggccagagag gatgggccac gggccaaggt cattgtcctg 000240 000241 tggagctggg atttaaatcc caaccctgtg cccacagagc cctgaccttg atggctctac tTTCTTGGGG ATTCAGTCAC 000320 000321 TGCCCCTGCC ACACCATCCT CCCCTTGATC AGACCCAGGG CCCCCAACAC CCGAAGAAGA ACTGTCTGCA GCTAGAGCCT 000400 000401 CTGAGGAAGG ACTGCACTGA CACAGCCGTG ATGTTTGCAG CCATCGGCCC CACTACGGCT CGCGCGCTGG CCGCCCAGGG 000480 000481 CCTTCCTGTA AGCTGCACTG CAGAGAGCCC CACGCCACAA GCCCTGGCCA CTGGCATCAG GAAGGCTCTC CAGCCCCATG 000560 000561 GCTGCTGCTG AGTCAGCCAC CTAGCGCTGG CCCCATGCAG CCTCCCTGGG CTGGGCTGGC TCTGGATGGA GCCAGGCATC 000640 000641 GGCAAGGGCT CTCGGGAGCT GCTGCCGTCA GACTCCTGCC TCAAGCCTGA GTGGAAGCAC CTGAGGACCG GGGATCGGGA 000720 000721 CCTGACCTGG GGCTGGCCTC AGGCCCACGT GCACGTGACT GCCCTCTGTG GAAGCCAGCT TAAACCCTAG CCCTGTGAGA 000800 000801 GCTTCCTGTG CCCAGCAGGA AGGAAGTCAA ATAAACCACA CTGACTACCT GTGCTTA |
Predicted Small Protein
Name | NONHSAT016916_smProtein_290:394 |
Length | 35 |
Molecular weight | 3891.6215 |
Aromaticity | 0.0588235294118 |
Instability index | 72.7411764706 |
Isoelectric point | 11.4043579102 |
Runs | 5 |
Runs residual | 0.0390915860015 |
Runs probability | 0.0 |
Amino acid sequence | MALLSWGFSHCPCHTILPLIRPRAPNTRRRTVCS |
Secondary structure | LHHHLLLLLLLLLLLLLLLLLLLLLLLLLEEELL |
PRMN | - |
PiMo | - |