NONHSAT017262

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT017262

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

8331 nt

Genomic location

chr11+:507275..515605

Exon number

1

Exons

507275..515605

Genome context

Sequence
000001 gcggggacta ctgggcgggg ctcggcgcgg gggcggggcc tggcgggagt agtctcgggg tcggggcggg gcccggcggg 000080
000081 cggggctcgg ctaagcacag tcttggcgca gcggcggggc ctggtggggc gtggctcggt gaggGAGGTC TCGCTTGGGG 000160
000161 GCGTGGTCTC CCCCAGTAGG CGGGGCTTGG TGCCGGGGGC GGGGTCTGGC GGGCGCGGGC GCGTGTGCGT GTTGTGGGCC 000240
000241 TCGCACTGGC ACGCAAGTCT CAGCAATTCC TGAGAATCCT CGGAGGAAGA GGCCGGGGCC CGGTGCGGCA GCGCCTTGGG 000320
000321 GGCGGAATCG CAGGCGCGGG TCGGGCCTTG CTggggcgcg gggcgcggcc cccggAGAAA GCGGCCGCCT CGGGACAGGA 000400
000401 GGGACCCGGG AGAAACCCCC CTGGGGCGGC TCCGCATGTC GGGGTCGCGA CTCTAGGCGA CCTTGGTAGA GGGGCTCGTT 000480
000481 TGCGCCGAGC TCGCGACCCC CGAGGGAGCC ACGGCCCCGT GAACCACGCT GCCCGTCCTG GCCACTGGCT GCCGCCTTTG 000560
000561 TTTCGTGGGA CCCCAGCCCG CAAGGCCTGC GGAGCCGCGG CCTCGTCCCG AGTGTTCTGA GCGCGGTCCG AGCTGCTCCT 000640
000641 GCGTCCACTC TGCTGCCGAC ACCCGAGCGT CGCCTGGAGC CCTGGCACTG AGGGGCGCAG GCCGAGTTCC AGACCAGCCT 000720
000721 GGGAAACGCA AAGCGACCCC ACCTCCACAA AAGTGGGTTT TCTTTAAGTT TTTGACTAGT CCGCAATTCA CAGAATTGAC 000800
000801 ATTTTGGCAG ATGAAGATTG CAAGTAAGGA AACTAACGGT ATCTCAGATT TGTTCTTTAG CAATTTGCTA AACCTCTCCT 000880
000881 CTGACTGCCT TTATTAGGTA tttgttttcg agacagggtc tcactccact gcttaggctg tactgcagtg gcgcgatccc 000960
000961 agctcgctgc agcctccacc tcccggactc cagtgatcct cccgcctcag cctcccaagt agctggtacc acaggcgcca 001040
001041 gcacgcctgg ctaattgttg tattttatgt agagaagagg tctccctgtg ttgcccagcc tggtcttgaa ttgggctcaa 001120
001121 gtgatcctcc tgcttcagcc tcccatatcg ctggaattac tggcataagc cactacaccc ggccTGATCA TCTTTAAAGA 001200
001201 AGGTGGTTCT ggccgggcgt ggtggctcac acctgtaacc ccaacacttt gggagaccga gaagggtgga tcacctgagg 001280
001281 tcaggagttc aagaccagcc tggccaacgt ggtgaaaccc catctctact aaaaatacaa aaattagcca ggcatggtgg 001360
001361 tgggcacctg taattccagc tacttgggag gctgaggcag gagaatcgct tgaacacggg aagcagaggt tgcagcgagc 001440
001441 ctagaccaca ccattgcact ccagttcggg caacaagatg aaactctggc tgggcgcggt ggctcacacc tgtaattcca 001520
001521 acactttggg aggccaaggc aggcagatca cctgaggtca ggagttcaag accagcctgg ccaagatgat gaaaccccat 001600
001601 ctctactaaa attacaaaaa cttagccagg catggtggtg catgcctgta atcccagcta ctcaggaggc tgaggcagga 001680
001681 gaaccacttg aacccaggag gcagaggttg cagtgagcca agatcgtgcc actgtactcc agcctgggca acaagagcga 001760
001761 aactccatct caaaaaagaa aaaagaaact ccgtctcaaa aagaaGGTGG TTCACACACA CACACACACA CCCCCAagaa 001840
001841 agctcagggc tggaaggcag ccaacctggc tgtgaccctc atcctgcaca cgtgagcttg gtgaccagta gctgattctt 001920
001921 taactctcta agctttggAG TCTGGATGTG AGGTTTAGAA TTCATGACAA GAAGCTGGAA GGATGCCGCC AGTCTGACTC 002000
002001 CTGGACTGGT TCTCTTGACA TCTTTGCAAA AGCTGCTGAA ATGTTCTGGT TTCATTTCAT TCTTTTCTTT GCCATGATCT 002080
002081 CTTAGATTTG TTCGTGGCAA TTCTCATAAG AGTGAAGAAA ATGTTTAAAA TGGCTGTTGG GCTCCCTTTT GTGACACCTT 002160
002161 GTGGGGAAGG TGCCCAGGTA TGTATAGGTG CTGAGCGCAC GGCCAGCATG GTGTCTGTGG CCGGGCCTCC CTCCTGGACA 002240
002241 GTGCGGCCAC AGCCCCTGAA AGGTATGTCT TCAtttttat tttattttat tgagatggag tctcgctctg tcgcccaggc 002320
002321 tggagtgcag tggcgcgatc tcggctcact gtaagctccg cctcccaggt tcaagccatt ctcctgcctc agcctcccga 002400
002401 gtagctggga ctacaggcac ctgccaccac gcccggctaa tttttttttt tttttttttt ttgtaatttt aatagagaca 002480
002481 gggtttcagc gtgttagcca ggatggtctc gagctcctga ccttgtgatt cgcccgcctc aacctcccaa agtgcCTGGC 002560
002561 CTTCATTTTT ATTTTTGAAC TTACCTGCCT CACCTCGTTA TGTCTTTATC TTATTTTTAA ACTTACTCAG TTCACCCACT 002640
002641 GTGGAATTGG GAGTATATGG AAGTATTCCC ACCCCCAGTT TTATATACCG CCCCAGAGCT GACCATTCTC GCTCATTTCC 002720
002721 CCGGGTCCTG GCCGACTCGA GTGTGCCTTT CCTTCCGATC CTGCTCCACA CAGATCTGAG GGATGCTGCC CTTTCCTTCT 002800
002801 CCACCTGCCC CTCCCTCACA TCCAGCCCCA CCAGCCTACA CGTTAGCTTA AATAGGGAGC TTTTACATTC CCCATGAAAG 002880
002881 GGAATCCAGG GACAGGCTGA GGCAAGAGAC CCCCAGTGTT CATGAGATGC CATCTAGAGA AAACACCGTG GTGCTGAAGG 002960
002961 CCTAAGTCAG ACCCCGGGGA GAGAGGCACC AGGGTGACTT TGGGTGGAGA GTCCTGTGCC TGTTCTACTT CTATAAATAT 003040
003041 ACTCAggtca ggcacggtgg ctcacgcctg taatcccagc acgttgggag gccgaggcag gcggatcatt tgaggtcagg 003120
003121 agttcaagac tagcctggcc aacatggtga aaccccatct ctactaaaaa tacaaaaaaa tggctgggca cagtggctca 003200
003201 cacctgtaat cccagcatgt tgggaggcca aggcaggcag atcatttgcg gtcgggagtt caagaccagc ctgaccaaca 003280
003281 tggagaaacc ccgtctctac taataataca aaaattagcc aggcatggtg gcacatgcct gtaatcccag ctactcggga 003360
003361 gactgaggca taagaatcgc ttgaacccag gaggcagagg ttctggtgag ccgagatcac gccattgcac tccagcctgg 003440
003441 gcaacaaaaa gcaaaactcc atctcaaaaa aaaaatacaa aaaaatgagc tgggcgtggt ggcctgcacc tgtaatccca 003520
003521 gctacttggg aggctgaggc aggagaatca cttgaaccca gaaggtggag gttgcggtga gcagagacca caccactgca 003600
003601 ctccagcctg ggtgacagag tgaaccatgt ctctaaataa ataaataaTA TGTTTGTCTG AAAGTGCCTT TTTAACAAAG 003680
003681 TATGAGATGT GTACATAAAG TGCACATAGC GCAAGTGTCG CACGCAGTGG ATTTTCACAC GCAGCACGTG AAATGGGAAA 003760
003761 ACACTggccc ggcacggtgg ctcacacctg tcatcccagc actttgggag gccgaggcgg gcggatcaca aggtcaggag 003840
003841 atcgagacca tcctggctaa cacggtaaaa ccgcgtctct actaaaaata caaaaaatta gccgggcgtg gtggcgggcg 003920
003921 cctgtagtcc cagctacttg ggaggctgag gcaggagaat ggcgtgaacc cgggaggcgg agcttgcagt gagccaagat 004000
004001 cgcgccactg cactccagcc tgggcgacag agctagactc cgtctcaaaa aaaaaaaaaa aaagaaaTGG GAAAACATTG 004080
004081 AGGATGAAGT AGCAAATATT TGAGAATTCA ACTTGATTGG TGGCTGTTGC AGGTTCATAC GTGAGTGGTT ACGTAGTGGG 004160
004161 TAGTTAAACT GACAATGACC AGCTGAATTT TGGTGACAGG ACTGCTCCTA AGGTTTGAAA TGTAGCGTAT CCTCTGATTC 004240
004241 ACGGGCTAAG CTCTGCCACT TAGCAGGAGG AGCTCATGAT AGAGCAGGTT GAGGGGAAAA CTTTGCCCCA TAAGGGTTCT 004320
004321 TCACTGCAAG TGAGAAGGTC TTGGCTTTGA GCCTCCAATT TCAATCAGAC AGAAAGCAGA CCAGTCGGCA GGACAGTATA 004400
004401 TGCCTCTGGA GATCCGTGCT GATGTGGGGG CCTCAGATAC AAGATGCCTC AGGGCCCAGG CGTGACCCTC TCCTTCCCTC 004480
004481 CTGCACGGAG ATGCTGTGAG AATTAGACAC TCCCACAGGG CCCTGTCAGA CACTGAGCTA GCCTCTGGGA ACCGGAAGAT 004560
004561 ATTCAAAACA CCAGCCACCC CCCACACACA CAGACAAGGC GCTGGAGGGA CAGCTGTGCA GCGGCAGAGC ATGAGAGGTC 004640
004641 TTGATCAGTT AACTCAGTGA GGTTAGGAGG CGAAtttttt tttttttgag atggagtctt actttgtcac ccagtcagga 004720
004721 gtgcagtggc gtgatctcgg ctcactgcaa cctccgcctc ctggcctcaa gtgattcttc cgcctcagcc tcccgagtag 004800
004801 ctgggactac aggtgcgtgc caccacaccc agctaatttt tgtatttttg gtagagacag tgtttcacca cgttggacag 004880
004881 gctggtctca atctcttgac ctcgttatct gcctgccctg gcctcccaaa gtgctgggat tataggtgtg agccacAAAG 004960
004961 CCtttttgtt ttcatttttg agatggagtc tcgctctgtc gcccaggctg gagtgcagtg gcatgatctc agctcactgc 005040
005041 aacctctgca tcccagttca agcagttctc cgcctcggcc tcctgagtag ctgggatcac aggtgcccgc caccacactt 005120
005121 ggctaatttt ttgtattttt agtagagatg aggtttcacc gtggtggcca ggctggtctc aaactcctga cctcaaatga 005200
005201 tctgcctgcc tcggcttccc aaagtgctgg gatgacactg agccaccgcg cctggcAAGG AGGTAACTTG ATCCATACGT 005280
005281 TTGCGTTTAC ATGGTGCgag gaaagggcac ccttggtaga tggaacagcg tgtacaaagg cccggaggtt taaaatcacc 005360
005361 actcttctag ccctcatact aactttgcct attttgaact ttatataaat ggaattatat tgcatgttct cttttgtatc 005440
005441 tgacttcctt ttctcaatac tatatgagtg gtatccatgc cattTAAAGT AATGGTGGAT TAACTCAATG CTACGTCGCC 005520
005521 TTCTAGTtga tggagggcag gcaagaccca cagtggggct gagcccctcg agggttcctg gctttgccca ggaaacaatt 005600
005601 caagggcaag ctggaagtga aagtaaacag GCCAGGCATG GTGggagtta ctaccccttt ccatggcaat gaccccacga 005680
005681 cccaaaagtt actacccctt ccctagaaac ttttgcctgg gctgcccctt aatctacatg aaattaaaag tgggtgtaaa 005760
005761 tgtggctgca gaactgtcct gagctgctgc tctcagcaca ctCTGCCCAG CACACCCCGC CTGCAGGGGC CGTCGCAGAG 005840
005841 CTGTAACCCT GCCGCTTCAA GCTGttttgt tttgtttttc tttcgagaca gtctcgctct gctcttccag tttgaatatc 005920
005921 acgcaggctg gagcgcagtg gcgcaatctc ggctcactgc aacctctgcc tcctgggttc aagcaattct gcctcagcca 006000
006001 cccgagtagc tgggattaca ggcacacgcc accatgcccg gctaattttt gtattgtatt agagacaggg tttcaccatg 006080
006081 ttggcgaggc tggtcccgaa ctcctggcct caagtgatct gcccgccgtc cgcctcagtg tcccgaggtg ctgggattac 006160
006161 aggtgtgagc caccgcaccc agcAaaagtg ctttctcgag atggaatctg cgcctggtga agatgctcta aacattgctg 006240
006241 agataacaaa ggatttagaa tattccataa acttcgttgg tacagcagcg atagggttcg agaggatttt ccagttgtga 006320
006321 gagaaggtct gctgtggaca aaatgctacc aaacagcatc gcgtgctacg gagaaatctt ttgtgaaagg aagaagctca 006400
006401 atgtggccag ctttattgtt gtcttatttt aagaaattgc TGGCCGGGTG TGGTggagaa tcacttgaac ccaggaggca 006480
006481 gaggttgcag tgagccgaga tcacgccatt gaactccagc tgggcataag agcaaaactc catctcaaaa aaaaaaaaaa 006560
006561 aaaggaagaa attgccacag ccacctcagc cttcagccac caccaccctg atcagtcagc agccacaaac aagaccttcc 006640
006641 accagcaaag agatcccaac ttcctcaagc ctcaggtgat tgctggcact ttctatcagt atcttagttt tttgtttgtt 006720
006721 tgttttttaa tttttgagac agagtctcac tctcttgccc aggctggaat gtagtggcac catctcggct cactgcaacc 006800
006801 tccgcctccc aggttcaagc gattctctta ccttagcctc cggaggagct gggactacaa gcacgcacca ccacacccgg 006880
006881 ctgatttttt tccattttta gtagagacgg ggtttcacca tgttggccag gctggtctcg aactcctggc ctcaggtgat 006960
006961 ccgcccacct tggcctccca cagtgctagg attacaggtg tgagccacca cccccagccA tttttttttt gagacgaggt 007040
007041 cttgctttgt tgcccagact agagtgcagt gacattatct cggctcacgg caacctctgc ctcccaggct gaagcaatcc 007120
007121 tcccacctct gtctccctag tagctgggac cacaggtgca cacccccaca cccggctaat tttttgtatt tttggtagag 007200
007201 acagggtttc accatgttgc ccaggctggt ctcctgagct catgcaatct gcccacttga cctcccaaag tgctgggatt 007280
007281 acaggtgtga gccactgtgc ccagcctatt attattatta tttattgttt ttttggtctt gagggagggt agggtggtgg 007360
007361 gagcccagtt ggggagggag tgaggagtgg tcaataaagt attttaaatt gaggcatatg cattgttttg taaacataat 007440
007441 gttattgcac acctgactgc actgtggtat aaacataact tttatatgca gtggaaaacc gaaaaatccc tccgactggc 007520
007521 tttattgcga catttgtgtt attgcggtgt ctagaactga accGTGGTAA CCCAGGCCCG CCTGTGCTAA CTTCCAGCAC 007600
007601 TACCGAGGTT GACGCAGCTA GATGGTTTTC TCCCCGGCTG GTTGCTGCTT CTCACCCACA GAGGCGGTGG AGCCCTTGGA 007680
007681 ACTGGGCAGA ACACAGGGCT GCCTTGTCAC CACTGCCTGG CTGAACCTGA AATTGGGCCG TTTGACAGAA AGACTTGAAA 007760
007761 GGGCCACCAG TAAATTCTTT TTTCTTTTCA TTGATTTTCC TCTTCTTACT TTCCTCCTCC TGAAGTTGGG GTCATGTCCC 007840
007841 AAGAAGACCC ACAAGGCCTG GCCTGTGGGT GCACATGTGG GGAGGGTCAG GTCTGTCGGC TGAGGAGGGC ATTGGTAGGG 007920
007921 GACTTTGAGC AGTGCTGCTC CGGAGACACG AATGATGGGA TGGGAGGCTC TCCCATATCT GCCGAGAGCA CAGCACCCCA 008000
008001 tgactcctgg gagcttgtca tagatgctgc agatgagtcc ttcctcagac gggatatttg ctaatgcctc tgccagcctg 008080
008081 ggcttgtctt ctcagggcct ttcaaaatgc acacaccctt cattctcatg atgtccagtg gatcaggttt tcctttatgt 008160
008161 gtcatgcttt tagtgtttaa gaatcatttc tctaacccaa gtcacactga catcctcctt ttcattctta acgcacattt 008240
008241 tacagttgta ggccttacat tttggcttat aataagttct gaggccaggc acagtgctca cacctgtaat cctggcactt 008320
008321 tgagaggcca a
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Predicted Small Protein

Name NONHSAT017262_smProtein_5147:5407
Length 87
Molecular weight 9425.9022
Aromaticity 0.0813953488372
Instability index 40.7581395349
Isoelectric point 10.290222168
Runs 15
Runs residual 0.034796945505
Runs probability 0.0398633928046
Amino acid sequence MRFHRGGQAGLKLLTSNDLPASASQSAGMTLSHRAWQGGNLIHTFAFTWCEERAPLVDGT
ACTKARRFKITTLLALILTLPILNFI
Secondary structure LLLLLLLLLLLEEELLLLLLLLHHHHLLLLHHHHHHHLLLLLHHHHLLLHHHLLLLLLLL
HHHHHHHHHHHHHHHHHHHLLHHHLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
LLLLLLLLHHHHHHHHHHHHHHHHHH
PiMo i???????????????????????????????????????????????????????????
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