NONHSAT017355
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT017355 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
609 nt |
Genomic location |
chr11-:880867..881475 |
Exon number |
1 |
Exons |
880867..881475 |
Genome context |
|
Sequence |
000001 CCTTTCCCTC ACCACCCAGC CTACCGCCCG ACGTGGTCCT TTCCCTCACC ACCCAGCCTA CCGCCCGACG TGGTCCTTTC 000080
000081 CCTCACCACC CAGCCTACCG CCCGACGTGG TCCTTTCCCT CACCACCCAG CCTACCGTTA ATCTCATCCA GTGCTTTTGT 000160 000161 CACCTCGTGT TGTAATTCAA TTTTTTTTAT TTTTTATGAG ATGGGGGTCT CACTATGTGG TCCAGGCTGG TCTTGAACTC 000240 000241 CTGGGCTCAA GCGATCCTCC TGCCTCAGCC TCCCAAAGTG CTGCGATGAC ACGCGTGAGC CACCAAGCCC AGCCAACATG 000320 000321 TTATAATTCT CTAGAGGCTT GCTTGGGGTC CCCTTTACGT CTTCCATGTC TCTACTAAAC TTTTGCAGAT TGGGATTCAG 000400 000401 TTGTAAGAAC TGCTGAGTGC CCATGTCTGC TGGTTCTGAT ATCAGGGTCG GTTTCAGGAG GCTGCTTTTC CTCCTTGTTT 000480 000481 GGGGTCCTAT TATGCTGCCT TCCTGTGGGC CTGGTACTCT CGGGTTGATG CCTGAGGCAT TGCGAATTTT ACCATGTTGC 000560 000561 GTGCTGGGTG TTTTAGCATT TTTATAAATC ATCTTAATCT TTGTTCTGG |
Predicted Small Protein
Name | NONHSAT017355_smProtein_422:586 |
Length | 55 |
Molecular weight | 5772.1001 |
Aromaticity | 0.0740740740741 |
Instability index | 55.9277777778 |
Isoelectric point | 8.71014404297 |
Runs | 9 |
Runs residual | 0.00397470641373 |
Runs probability | 0.0559382912324 |
Amino acid sequence | MSAGSDIRVGFRRLLFLLVWGPIMLPSCGPGTLGLMPEALRILPCCVLGVLAFL |
Secondary structure | LLLLLLLHHHHHHHHHHHHLLLEELLLLLLLLLLLLHHHHHHLLLHHHHHHHLL |
PRMN | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHHL |
PiMo | iiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTTTTTTTi |