NONHSAT017585

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT017585

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1477 nt

Genomic location

chr11+:3402191..3430378

Exon number

11

Exons

3402191..3402274,3404692..3404776,3405397..3405514,3422989..3423097,3423843..3423959,3424145..3424182,3424823..3424882,3426084..3426193,3427729..3427945,3428852..3428927,3429916..3430378

Genome context

Sequence
000001 ctcatttttc tcttgccgcc accacgaaag aagtgccttt tgcctcccgt catgattctg aggcctcccc agccatgtgg 000080
000081 aactGTTTGA GGCACAGAGC TGTATATACA ATAACAGTGA AATTGATCCC ACTACTAATT ATGACAAAAA TGATCTTCCA 000160
000161 CGTAAACAGG TGGTGAAGCT CCTTATGGTC CTGACCCTAC AGTTCCTGTC CCATGACCAG GGCCAGATCA CCAAGGAGCT 000240
000241 GCAGCAGTTC GTCGTCAGTG GCAGCCCCAT GCGAGCACCC GAGGAAGGGC TGTGACCGTC TATGACAAGC CAGCATCTTT 000320
000321 CTTTCAAGAG ACCTCTGGAC CTGCAGCACC AACTCTTCAT GAAGCTGGGC GGCACGCACT CTCCGTTCAG GGCCTGAACC 000400
000401 TGAGGACCCA GACACGGAGC GGTCGGCCTT CATGGAGCGG GATGCTGGGA GCGGGCTGGT GATGCGCCTC CGCGAGCGGC 000480
000481 CAGCCCTGCT GGTCAGCAGC ACAGGCTGGA CAGAGGACGA AGACTTCTCC ATCTGCTGGC AGCTTTAGAA AAGTTTGAAC 000560
000561 AACTGACTCT TGATGGACAC AACCTTCCTT CTCTCGTCTG TGTGATAACA GGCAAAGGGC CTCCGAGGGA GTATTACAGC 000640
000641 CGCCTCATCC ACCAGAAGCA TTTCCAGCAC ATCCAGGTCT GCACCCCTTG GCTGGAGGCC GAGGACTACC CCCGCTTCTA 000720
000721 GGGTCGGTGG ATCTGGGTGT CTGTCTGCAC ACGTCCTGCA GTGGCCTGGA CCTGCCCATG AAGGTGGTGG ACATGTTCGG 000800
000801 GTGCTGTTTG CCTGTGTGTG CCGTGAACTT CAAGTGGCAG GAGCAGAACC CGAATCTTTC TGGGGATAGC TTCACAGATC 000880
000881 CACCGCTGAG GAGGAAACAG TGCAGAGCGA GCTGCCCACA GTGAGGCCCT GCTCCTGGTT TACATGAGCT GGTGAAACAT 000960
000961 GAAGAAAATG GCCTGGTCTT TGAGGACTCA GAGGAACTGG CAGCTCAGCT GCAGGTGCTT TTCTCAAACT TTCCTGATCC 001040
001041 TGCGGGCAAG CTAAACCAGT TCCGGAAGAA CCTGCGGGAG TCGCAGCAGC TCCGATGGGA TTAGAGCTGG GTGCAGACTG 001120
001121 TGCTCCCTTT GGTTATGGAC ACATAACTCC TGGGCCAGAG GCTAAAACCC CGGGACCCCT GCTGTCCTTC CCACAGCTTC 001200
001201 TTCTCAGAGT CTCAGGGCAA ATCCTTTCGA GCAGCGCCTC CCAGTGGCCA GAAGCTGAAA TGATGGCAGT AGTGCCACCT 001280
001281 GGTGAATGAA TTGGTTCTGT GACCCGGGAA GCTGTGCTTG GCTCTGATTT CTTTTCTGGA GGCTCGGAAA CACTTCCTCT 001360
001361 CTTCTTCTGT TCTTCACGCC CCATGCCCCT GCTAGCGTAT TACTGTTCTG TGACTTCCCT GTGACCTCTG CAGTACTCCT 001440
001441 CATCCTGCGT TTGGTCTCCA GGTGTCACCT TTCTGCC
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Predicted Small Protein

Name NONHSAT017585_smProtein_1094:1288
Length 65
Molecular weight 6635.5744
Aromaticity 0.0625
Instability index 50.2375
Isoelectric point 4.55706787109
Runs 10
Runs residual 0.00765625
Runs probability 0.0371842430666
Amino acid sequence MGLELGADCAPFGYGHITPGPEAKTPGPLLSFPQLLLRVSGQILSSSASQWPEAEMMAVV
PPGE
Secondary structure LLLEELLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHLLEEELLLLLLLLHHHEEEEL
LLLL
PRMN -
PiMo -