NONHSAT017612
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT017612 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1005 nt |
Genomic location |
chr11-:3689730..3691117 |
Exon number |
2 |
Exons |
3689730..3690580,3690964..3691117 |
Genome context |
|
Sequence |
000001 CCAACTACAC AAGTGCCCTG AGACCTGTGG CAGACACAGA CCAGACTCTG AATGTGACCC TGGAGGTGAC ACTGTCCCAG 000080
000081 ATCATCGACA TGGTGCGTTG TGGTGGTGGT ACAGCTGTGG AGTCTTACCT GTCACAGTGT CAAGAAATGA AGGGGATGAA 000160 000161 CGGAACCAGG TGCTGACCCT GTATCTGTGG ATACGGCAGG AGTGGACAGA TGCCTACCTA CGATGGGACC CCAATGCCTA 000240 000241 TGGTGGCCTG GATGCCATCC GCATCCCCAG CAGTCTTGTG TGGCGGCCAG ACATCGTACT CTATAACAAG TACTGCCTAT 000320 000321 CTGGGCCCCT CCTCTCTCTT ACCCCTCTCT AGACTTGCCC TTAGCTGTGG GGGTGTAGTG ATCCCCTCTC CCTACCACAT 000400 000401 AACCTGGTTG CCACGCTGCC CTGGAAGCTT TTCCCCAGGA CCCTTCTAAG CTGCCAGGCA CTCAGCCCCT CCATGGCACC 000480 000481 CCCACTTTAG GCTATCCCAG GCCAGCCCAG GCTGAACGTC TCCTCGGAAC CTACTGTGTG GTCCAGGGCA GTTGTCTGAA 000560 000561 TCACAAGGGC CTCTCTAGGG CACACTTTTA GCTCTAAGTC TCTCAGGGCT CCCCGAAGAG CCTGTGTAAG GGTCTCTTTC 000640 000641 CTCCAGGACA TAGCCCTCTG GAACACTGCT TTATGTCTCC TTGACCAGTT CCGTGTCTCC CAGCCAGCAC ATAGCTCTGC 000720 000721 ATATTTTCTC TGGGGCCCTT CTACAAGTTT TGCAGATGTC CCCCAAGGGA AGTCACTGTG TGTCCCGGAG CTACCTCTGG 000800 000801 GTTCTGCAGA GGCCTTTTTA TACATCCTCT GGCTACGTCT GTGTCCCTTC TGGGCCCTTC AGGCACCACC CCTTCCAGGC 000880 000881 CTCGAAAGGC AGCGGGTCTC TCTAGGTGCA CTCCACCCTC TGTGTTGCTT TGTTCTGAAa acaagaatca aattaacgaa 000960 000961 aaaaaaacaa gcacaagttt atttatttat ttgagacaca gtctc |
Predicted Small Protein
Name | NONHSAT017612_smProtein_209:448 |
Length | 80 |
Molecular weight | 8231.5216 |
Aromaticity | 0.101265822785 |
Instability index | 83.3518987342 |
Isoelectric point | 7.73052978516 |
Runs | 13 |
Runs residual | 0.0242760534073 |
Runs probability | 0.0428913075972 |
Amino acid sequence | MPTYDGTPMPMVAWMPSASPAVLCGGQTSYSITSTAYLGPSSLLPLSRLALSCGGVVIPS PYHITWLPRCPGSFSPGPF |
Secondary structure | LLLLLLLLLLEEEELLLLLLEEELLLLEEEEEEEEEELLLLLLLLHHHHHHHLLLEEELL LLEEEELLLLLLLLLLLLL |
PRMN | - |
PiMo | - |