NONHSAT017902
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT017902 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
738 nt |
Genomic location |
chr11-:9049036..9052807 |
Exon number |
3 |
Exons |
9049036..9049108,9051431..9051592,9052305..9052807 |
Genome context |
|
Sequence |
000001 TCTCTCTCCT GCATTGCAGG GGATGCCTAG GCAGTGTGTA GGCCTAAGCC TGAGAACTAC CCAGGCCTTC CCATACTTTG 000080
000081 GAAGCAGTTG ACACTTGACT TCTTGGTTTC CATCTTTGCA CTGTGCTGTG TAGCCCTGTG TGTAAACAGC AGGCACTCAT 000160 000161 GTGCCATTGA CTCAGGGTCA GAAGCACCAC AGCATTGACT GTGTGCTCTC TGACTGAGGT GGGAACTGCG GTCAGCACTG 000240 000241 GGTAACAGGT TGGACTGAAG TTGGTCTCAT TTGGAGAGTG GGGAGCAAGG GTCTGCCTGG AGGCCTTGCT CACGTAAGGC 000320 000321 TATTGGTCCT TCCAGGTCTG TGTCAACCTG GTGAATATTC TGCAGATGGC TTTGCACCTT GCCATCTCTG TGCCCTGGGC 000400 000401 ACGTTCCAGC CTGAAGCTGG TCGAACTTCC TGCTTCCCCT GTGGAGGAGG CCTTGCCACC AAACATCAGG GAGCTACTTC 000480 000481 CTTTCAGGAC TGTGAAACCA GAGTTCAATG TTCACCTGGA CATTTCTACA ACACCACCAC TCACCGATGT ATTCGTTGCC 000560 000561 CAGTGGGAAC ATACCAGCCT GAATTTGGAA AAAATAATTG TGTTTCTTGC CCAGGAAATA CTACGACTGA CTTTGATGGC 000640 000641 TCCACAAACA TAACCCAGTG TAAAAACAGA AGATGTGGAG GGGAGCTGGG AGATTTCACT GGGTACATTG AATCCCCAAA 000720 000721 CTACCCAGGC AATTACCC |
Predicted Small Protein
Name | NONHSAT017902_smProtein_365:652 |
Length | 96 |
Molecular weight | 10704.4636 |
Aromaticity | 0.0631578947368 |
Instability index | 55.9231578947 |
Isoelectric point | 5.48541259766 |
Runs | 16 |
Runs residual | 0.0393700787402 |
Runs probability | 0.0480977300831 |
Amino acid sequence | MALHLAISVPWARSSLKLVELPASPVEEALPPNIRELLPFRTVKPEFNVHLDISTTPPLT DVFVAQWEHTSLNLEKIIVFLAQEILRLTLMAPQT |
Secondary structure | LLEEEEEELLHHHLLLLEEELLLLLLLLLLLLLHHHHLLLLLLLLLEEEEELLLLLLLLL LEEEEEHHHHLLLHHHHHHHHHHHHHHHHHLLLLL |
PRMN | - |
PiMo | - |