NONHSAT018375
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT018375 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
899 nt |
Genomic location |
chr11+:21804218..21864624 |
Exon number |
5 |
Exons |
21804218..21804272,21816322..21816450,21832595..21832849,21839705..21839889,21864350..21864624 |
Genome context |
|
Sequence |
000001 agttgtacgc atacccaact gaagctttct tcccttctcc agtggagtgc acctggcaca gaaactctct ctgtaccacg 000080
000081 tacctgctgc cagaagctgg gaaggagtgg tgctggtgat tcaaaactga ttttcctgcc tcttcgatgc ctcttttagt 000160 000161 gacatacagt taagaccagg cactgaAGAG GCCAGTGCAC CAAGGAgtgc agctgcaggc atgggggtgg gcaggaggca 000240 000241 cagagccggt gctgaggggc tgcagtcaga gcaggaggtt gagaaaaagg cttatggaga gagaaagaag aaagcaatat 000320 000321 cccgtctacc tacagtccct tgagtgttct ttcaactacc tgccacctat ccaccagctc cccttggacc ccagcttggg 000400 000401 tgggaacctg acacttggcA TACTAAgcag cattctgagG GAGAGGATCT GAGATGGTAT AGAAGTGTTT GTATCCCAGC 000480 000481 AGCAGGTGGA AGCCAGGGGA TGTCTACCAA AGTTGTAAAT GCATGTATTC TGTGGTGTAG CTGAGAGATA GCTGCCTCAC 000560 000561 AGAGTATGCC ATGGAAAATT CTAAGGATGA TGAGGCCAGA CCACTCTGCA TGGATCCACA GCAGgtaaat ccacttctga 000640 000641 ggagaagaat gaaagccaag gcagatatga aagagccatg gactgctgac ctttgaaccc tgagaggagt gcagagctca 000720 000721 ctcatattct aatgaagtat ttttctACCC TTATTATGAT TCTGACTCAC TATACTTCTT ATCAAAATTA CATGATGAGG 000800 000801 AATTGTATGT TTGAATAGCA GTCAAATGAG AAGAGACTTT ATCATTTAGC AAATCTATCT GCCCAATTTC GTAGCTTGAG 000880 000881 ACAATGCAAA AATGTCAAC |
Predicted Small Protein
Name | NONHSAT018375_smProtein_293:451 |
Length | 53 |
Molecular weight | 6055.9816 |
Aromaticity | 0.0769230769231 |
Instability index | 82.8269230769 |
Isoelectric point | 7.94036865234 |
Runs | 7 |
Runs residual | 0.0157540199913 |
Runs probability | 0.0390264213795 |
Amino acid sequence | MERERRKQYPVYLQSLECSFNYLPPIHQLPLDPSLGGNLTLGILSSILRERI |
Secondary structure | LLHHHHLLLLEEEEELLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |