NONHSAT021208
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT021208 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
825 nt |
Genomic location |
chr11+:46958296..47074553 |
Exon number |
3 |
Exons |
46958296..46958402,47008759..47008861,47073939..47074553 |
Genome context |
|
Sequence |
000001 GACGGCAACC TGGGTTCCGG AAGCCGGAGA GCTGGAGCTT TGAAGCCACC CCGGTCAAAG GATGCTGAGT CCGGAGCGCC 000080
000081 TAGCCCTACC GGACTACGAG TATCTGGCTC AGCGACATGT CCTCACCTAC ATGGAGGATG CAGTGTGCCA GCTGCTAGAA 000160 000161 AACAGGGAAG ATATTAGCCA ATATGGAATT GCCAGGTTCT TCACTGAATA TTTTAACAGT GTATGCCAGG GAACACACAT 000240 000241 TCTCTTTCGA GAATTCAGCT TCGTCCAAGC CACCCCCCAC AATAGGGTAT CATTTTTACG GGCCTTCTGG AGATGCTTCC 000320 000321 GAACTGTGGG CAAAAATGGC GGTAAGTCTT CCCAAATTCT TTttccttcc ttccttcctt ccttcctttc ttccttcctt 000400 000401 ccttcctctc tctctctttc tttctctctc tcttttcctc tctttctctt tcAAACTTTT TCTTTTGTTC CTATAAATAT 000480 000481 TGTTTGAATG CATGCTATTC AAGGCATTTA GAATACCTCA CTTTTGAGGA GTTGTCTGGT TTATGTCAAA GATATTACTA 000560 000561 TTACCACTac catcactaat ggtacctatt aagagccaag tgtagctctt tacatgtagt aactcattta tctttacaag 000640 000641 ggctctctgt ggtagatacc ataatcccca ttttgtaact aatgaaactg aggatcagag aggttaagta acttggcaag 000720 000721 gttacatagt aaattctggg cccagattta tacccaggca gtctgacttc acagcccttg ctcttGGCAG ATATTAAAAT 000800 000801 GCCATGCAGT AAATACAAGG AATAA |
Predicted Small Protein
Name | NONHSAT021208_smProtein_182:475 |
Length | 98 |
Molecular weight | 10879.59 |
Aromaticity | 0.19587628866 |
Instability index | 51.7135051546 |
Isoelectric point | 6.70672607422 |
Runs | 13 |
Runs residual | 0.00248186330661 |
Runs probability | 0.0527767586592 |
Amino acid sequence | MELPGSSLNILTVYAREHTFSFENSASSKPPPTIGYHFYGPSGDASELWAKMAVSLPKFF FLPSFLPSFLPSFLPLSLFLSLSLFLSFSFKLFLLFL |
Secondary structure | LLLLLLLHHHHHHHHHHLLEEEELLLLLLLLLLEEEEELLLLLLHHHHHHHHHHLLLLLE ELLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLL |
PiMo | oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo ooooTTTTTTTTTTTTTTTTTTTTTTTTTiiiiiiii |