NONHSAT021368
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT021368 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1140 nt |
Genomic location |
chr11+:55441012..55442151 |
Exon number |
1 |
Exons |
55441012..55442151 |
Genome context |
|
Sequence |
000001 ACGATCTGTT GATAGTTTTA CATGATTGTG ATTACATTGT AAATGTTTTA ATCCAAATTC ATTTTTCCCT AGATACTTTA 000080
000081 TTTTTGCATA GCACACAACA TATGGAAAGT CAAAGGAACA TATAAAAATT CATACTCATG AGCCTTTCCT CTATCCAGAA 000160 000161 CATACAAATA TTTGTTTTTG TGTTCTTATT TTGTAATGTT GCCATCTTGG TGGGAAACTT TCTGATCCTT ATCTCTATTT 000240 000241 GATGTAGTCC TCTTTTTAAC CAACCAATGC ACTATTTCTT CAGGCTATAT GAATATCTAC TATACCTCCT GTGTCACACC 000320 000321 CAAAATAATT GGTGATCTAG TAGTGGGAAG AATAAACATC TCCTATGATA GGAGTCTTTC CCATGCACTT CTTTGGAATC 000400 000401 ATTGAAATCT TCATCCTTAC AGTCATGGCT TTTGATCACT ATGTTGCCAT CTGCAAACCT CCCCGCTACC TAATTATCAT 000480 000481 GAATAGGACA AAATACAATA CTCTAATCTC GGTTGCTTGG CTGTTGGGGC TTTCCATTCT TTGTTTCAGT TTTCTATGAA 000560 000561 AATCTGGTTG CCTTTCTGTG GCTCCAACAA AATTGATGAC TAATATTAAG ATATTTTTCC TTTACTGAAA GTCGCTTGTA 000640 000641 CTGATACCTG CATCACTGGT GTCCTCGTGG TTGCCAATTC TGGAATGTTT GCCTTGGTAA CCTTGTTCTG TCGTTTGGCT 000720 000721 CTTATGTCAT TATACTATTC CCCTTAAAAA ATCATTCAGT AGAGGGAAGA TGCAAAGCCC TCTCTACCTG TGGATCTCAT 000800 000801 ATCACCATGG TAATCTTTTT CTTCGAACCT TCAATCTTTG CCTACCTTAG ACCTTCTCAC TTTTCCTGAG GACAAAATAT 000880 000881 CTGCTCTGTT TTACACTATT ATTGCTCCAA TGTTCAACCA CCTAATCTAT AACCTGAGAA ATACAGAGAT GAAAAAGGCC 000960 000961 ATGAGAAAAG TTTGGTACCA AATATCATTT TCAGAAGAAA AACAGCTGAT TTGTCCTACT TAGTGTACTA AAGAACTTTA 001040 001041 TGCAGCAGGA AAAGTGTACA TGTCTCCAAC GACTGCTGTT AGGTTATAAA TTTTTTCCTT TTCTAGTTTA AAAttttact 001120 001121 gtggtaaaat atgtataaca |
Predicted Small Protein
Name | NONHSAT021368_smProtein_137:241 |
Length | 35 |
Molecular weight | 3817.643 |
Aromaticity | 0.147058823529 |
Instability index | 43.1323529412 |
Isoelectric point | 5.27276611328 |
Runs | 5 |
Runs residual | 0.0390915860015 |
Runs probability | 0.0145557322028 |
Amino acid sequence | MSLSSIQNIQIFVFVFLFCNVAILVGNFLILISI |
Secondary structure | LLLLHHHHHHHHHHHHHHHHHHHHHLLEEEEEEL |
PRMN | LLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLL |
PiMo | oooooooTTTTTTTTTTTTTTTTTTTTTTTTTii |