NONHSAT021386
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT021386 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
927 nt |
Genomic location |
chr11+:56102618..56103544 |
Exon number |
1 |
Exons |
56102618..56103544 |
Genome context |
|
Sequence |
000001 ATGGGCCAAA AGAATCTAAC AGTGCTTACT GAATTAATTC TGATGGAAAT CACAAGGCGG CTTGAGCTGC AGCTCTCCCT 000080
000081 TTTTTGGGTC TTCCTCATCA TCTGCACATT CACAGTGGTG AGCAAAGAGT GCATAATCAT TTTGAACAAT GTGGACTTGG 000160 000161 GTCTACACAA CATTTGTGTA TTTTTTAAAT CAGGTACCTG AATTTTATTA ATCTTGGTAA TTCTATGGTC ATTTATCCCA 000240 000241 AGATACTGGT AAACTTTGTT GTGGCTCAAA ATGCCATTCC CTGTTATGCA TGTACCATGC AGATGGCTTT CTTCATTATG 000320 000321 TTCATTATCT GTGAACTTTT CGTCTCATCA GCCATGGCCT ATGACCACTA TGTGGACATC CATAGCCTTC TGCCATAAAA 000400 000401 TGTTATGTCT CAGGAACTTT GTCATGTGCT GGTGGTATTC CATACCTTTA TAGTACCTTT CAAGCTCTGA TGGTCACTAT 000480 000481 AAAGATTTTT ATATTGGCCT TCTATGGCTC CAATGTCATA AGTTATTTCT ACTGTTAAGA TGTTTCTTTG TTAGCCATGG 000560 000561 TGGACTCAAA TGCATGAGGA ATAGAAATGT TGATCACACT ATTTTCAGTA CTTAATTTGA TATTCTTTCT TCTGGTAGTC 000640 000641 CTAATGTCCT CCATGCTGAT TCTATTAACT GTTTGTTGAA TGCATTCTGC AGAGAGCAGT AAAAAACTTT CTTCACGTAT 000720 000721 GTTTCTTGTC TGATAGTGGT GGTTGTGTTC TGTGGGTTTC TATACTTTAT GTACTTGCAG CTCAAATTCA GTTCCTTTTT 000800 000801 TTTTGATAAT AATAAAATGA CCTCCATGTT TTCCTCTTTA GTGATTACCA TGCTTTACCA TTTGGTCTGT AGTGTAAAGA 000880 000881 ACAAAGGGAG TAAAAAAAAT GCCTTCTATA GTTTTTTTAT GAAGCAG |
Predicted Small Protein
Name | NONHSAT021386_smProtein_224:397 |
Length | 58 |
Molecular weight | 6537.8575 |
Aromaticity | 0.157894736842 |
Instability index | 48.1526315789 |
Isoelectric point | 5.20343017578 |
Runs | 7 |
Runs residual | 0.0311403508772 |
Runs probability | 0.0265349382996 |
Amino acid sequence | MVIYPKILVNFVVAQNAIPCYACTMQMAFFIMFIICELFVSSAMAYDHYVDIHSLLP |
Secondary structure | LEEELHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLL |
PRMN | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTooooooooooooooo |