NONHSAT021468
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT021468 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
928 nt |
Genomic location |
chr11-:58133309..58134236 |
Exon number |
1 |
Exons |
58133309..58134236 |
Genome context |
|
Sequence |
000001 ATGAAGAACT GTACAGAAGT GACAGAGTTC ATCCTCCTGG GACTAACCAA TGCTCCAGAG CTACAAGTCC CCCTCCTTAT 000080
000081 CATGTTCACT CTCATATACC TTGTCAATGT GGTTGGAAAC CTGGGGATGA TTGTTTTAAT TGTTTGGGAC ATTCATCTCC 000160 000161 ACACTCCCAT GTATTTTTTC CTCAGTCACC TGTCTCTAGT GGACTTTTGT TACTCTTCAG CTGTCACTCC CACAGTCATA 000240 000241 GCTGGGCTCG TTATAGGAGA CAAGGTCATC TCTTACAATG CATGTGCTGC TCAAATGTTC TTTTTTGCAG CCTTTGCCAC 000320 000321 TGTGGAAAAT TTCCTCTTGG CCTCAATGGC CTATGACCGC TATGATGCAG TGTGCAAACC CCTACATTAC ACCACCACCA 000400 000401 TGACAACAAG TGTGTGTGCA TGTCTGGCTA TAATCTGTTA TGTCTGTGGT TTCTTGAATG CCTCCATACA CATTGGGGAA 000480 000481 ACATTGTCTC TCTTTCTGTA TGTCCAATGA AGTCCATTGC TTTTTCTGTG ATGTTCCACC AGTCATGGCT CTGTCTTGCT 000560 000561 GTGATAGACA TGTGAATGAG CTAGTTCTCA TTTATGTAGC CAGTTTCAAT ATCTTTTCTG CCATCCTAGT TATCTTGATC 000640 000641 TCCTACCTAT TCATATTTAT CACCATCCTA AAGATGCACT CAGCTTCAGG ATACCAGAAG GCTTTGTCCA CCTGTGCCTC 000720 000721 CCACCTCACT GCAGTCATCA TCTTCTATGG GACTATTATC TTCATGTACT TACAGCCCAG CTCTGGTCAC TCCATGGACA 000800 000801 CAGACAAACT GGCATCTGTG TTCTATACTA TGATCATCCC CATGCTGAAC CCCCTGGTCT ATAGCCTGAG GAACAACGAA 000880 000881 GTGAAGAGCG CATTCAAGAA AGTTATTGAG AAGGCAAAAT TGTCTCTA |
Predicted Small Protein
Name | NONHSAT021468_smProtein_419:574 |
Length | 52 |
Molecular weight | 5877.0201 |
Aromaticity | 0.137254901961 |
Instability index | 55.8862745098 |
Isoelectric point | 6.20574951172 |
Runs | 8 |
Runs residual | 0.00262085032033 |
Runs probability | 0.010024730613 |
Amino acid sequence | MSGYNLLCLWFLECLHTHWGNIVSLSVCPMKSIAFSVMFHQSWLCLAVIDM |
Secondary structure | LLHHHHHHHHHHHHHHHHLLLEEEEEELLLHHHHHHHHHHHHHHHHHEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLL |
PiMo | ooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTiiiiiiiiii |