NONHSAT021484
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT021484 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
902 nt |
Genomic location |
chr11+:58652420..58660933 |
Exon number |
5 |
Exons |
58652420..58652497,58652909..58653014,58659690..58659816,58660135..58660307,58660516..58660933 |
Genome context |
|
Sequence |
000001 ATGATCCTGC TGAATAATTG CCAGATGCTG CTGGCCCTGT ACGAATCCCT GGCCGTGAGC ATTCCTGAGT CCCTGAAGAT 000080
000081 ATGGCTGTGT GTATCACATC AATCATAGGA ACCCCTTCAA CATGGAGGTG CTGGTGGACT CCTGGCCCGA GTATCAGATA 000160 000161 GTTATTATCC AACCACCAAA ACAGGATATG ACTGACAACA TGGATTCTTA CACAAATGTA TATCATATAT TCTCCAAAGC 000240 000241 TCCTCAAAAA TCACAAGAAG TTTTGAAAAA TTGTGAAATC ATAAACTGGA AACAGATACT CCCTTGGAGG AGTCTTCAAG 000320 000321 AAAGTTTAGG TGAGGGGATA AGAGCAGCTG CATTTTCAAA GTCAGTGAAG GTAGAGCATT CAAGAGCATT CCTCTGTATT 000400 000401 ATGGAAGATA TCCTGAAGCT CAATGCCTGC AATAAAAGCA AGCTTGGAAG TAGGGATGAG ATAGGCCACC CAGATGATGA 000480 000481 ATTTTAAAAC TCCCAATTTT AAATATGCCA AGCTGGGTGT CTCTTATTCT GGGCTGGTAA ATGACAACTG GAGGCGAGGG 000560 000561 AAGAATGAGA GGAGCCTTCC TTACATCAAG CGCTGCATAG GAGCCATGCC AGCAGCCTGT ATCCTGGGTC CACAGGGGGC 000640 000641 CCTGGTCTCA TGGATAACCA TGGACTCTTC TTGTGAAGTA GGAATGGCCT ACAGCATGAA AAAATACCGA AGGAGAGGCA 000720 000721 ACATAACATA GGTGAACATG AGATTCACGA AATATCTGCG TCATAAGAAT ATTCCATTTT ACCTCTCTGT GCTGGAGGTA 000800 000801 AATAAAGGCA CCCACACATT TCTGGTGAAG GTCGGTTCCT TTGTGGCCAC CTGTGAGTGG CACCAATGGA CCTGCTACCC 000880 000881 ACAGAATCTA GTTCCATTTT AG |
Predicted Small Protein
Name | NONHSAT021484_smProtein_473:730 |
Length | 86 |
Molecular weight | 9601.1984 |
Aromaticity | 0.105882352941 |
Instability index | 56.6694117647 |
Isoelectric point | 10.0267944336 |
Runs | 13 |
Runs residual | 0.0163992869875 |
Runs probability | 0.072547660783 |
Amino acid sequence | MMNFKTPNFKYAKLGVSYSGLVNDNWRRGKNERSLPYIKRCIGAMPAACILGPQGALVSW ITMDSSCEVGMAYSMKKYRRRGNIT |
Secondary structure | LLLLLLLLEEEEEEEEEEEEEELLLLLLLLLLLLLHHHHHHHHLLLLLEEELLLLLEEEE EEELLLLEEELLLHHHHHHHLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHH HLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTT Toooooooooooooooooooooooo |