NONHSAT023191
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT023191 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1982 nt |
Genomic location |
chr11+:76498677..76500442 |
Exon number |
1 |
Exons |
76498677..76500442 |
Genome context |
|
Sequence |
000001 TTCTAGATGC TTGGTGCATC TTCACGTGGT GTCTGCTCTG TACCAGGCTC AGTGCTCAGC TTCAAGGGCA TAAAAAGGAA 000080
000081 CCTAATCGCA TCCCTGCCCA CAGTAGGGTA GACAGTTAAA CATGTAAGTA CAGTTCAGCA TGACCAGGTC TAAGCACATG 000160 000161 TGCTCATTTG TAAGCTGAGG CAGAGTGGAT TTGGAGCTAA GACATCTGGG GTTAAGTCCG GGGTCCTCTC CTTCCCAGCT 000240 000241 GAGTAACATC CATTTCTGTG TCTGCAAAAT AGGGACAGTA TCCCCAGGGT CAAGGCTCTG GTGAGGCAGA AGTGAGATGC 000320 000321 TGGTGGAGAG CACATGGTGG GCTGCTGTGT TTGTCCAGAT GTGCTGCATT GGTGGGTCTG TTGCAAGAGC TGGCCCTCAG 000400 000401 GGCTCCGGGA GTCTGGCCTT GAAATTCTTT CTGCCTTGCG TTTCCAGAGC TGACAAAGTG GTTGGAGGGC AGGACGTTTC 000480 000481 TGAACCATCC ACCTGGGGAT TTCCTCGGCA TCAGCTTGAG TGAACTCATG ACTGAGGGGA GCAGGGTGGG AGGCAGCTCT 000560 000561 GTGTTGAGGA ACAGCTGATC GAGACAAAGG CCGGTCTCGG GGGTGCTGGG GCCCTGTACC AGTGGGGCCC TGTGCCAACA 000640 000641 GTGCCCTGTG GAAGTTGTCG AGGGCGGTGG GGGGAGCTGG AAAACTTTAC AGACCAGAGA TGCTGTAGTG CAGCACCAGG 000720 000721 GTCAGGCAGC TGGGGCCAGG TAGGTTCAAG CTGGAACCCA ACACCCAGAG AGCTGTCCTT ATCAGCAGAC ACCAGGGAAG 000800 000801 TGACTGAAGA ATGTCATCAC AGCCAGTCTC GGACCTGCTG TGCTCCTGGC GCCACACTGG GAACTTGGGT GGGGAGGAAC 000880 000881 ATGAAGGATC ACATGGTGAC TGCCTTCAGA AGGCTTAGCA AATCACCGTC ATTGTCTACC ACACATTGAG TATTTGTGTA 000960 000961 GCAGATAGTG AGTGGAATGC CTGCCATTCT GTCATTTAAT CCTTTCAACA AACCTGTGTT CTTAGCCCTG TTGAGGACCC 001040 001041 TCGGAGCGGG TCCCAAGACT TACCCAAGGC TGGTAGGTAC AGAGCTAGGT TCACACCTGG TCTGGGTCTT GCGGTTGACC 001120 001121 CGTTCATCCT GCTCTTCCTC CACACACCCT CTAGGCCTGG CTCTGATCCC AGGTGGGGGA AAGAACACAC AGGTAAAGTA 001200 001201 GGCAGGGCAC CGCCCCAAGC TGCTTACACA TCAAGTAGGA AAACAGCAGG TAACTCACGG CAGAGAATTT ACTGAAGGAG 001280 001281 GCCTGTGGGT AGCCTGTGGG GTGAGAGGCC AGGAGGGAGG GGTGGCCCGA GGGCCTGAGT GGACAGAACA GGCTTTGTTT 001360 001361 TGCTGGGAGC AGGCCAGGGG CAGGCGGGAT GGATGCATGC AGTTCTGGCA GTCACATGAG GCATCAGGTC CCAGGTCCTG 001440 001441 GGCCCTGCTC TGCCATTCCT TGCTGTCACT GCCCCTCTCT GGGCCCCAGT TGCCCATGAT CCCCAAGGGG CCTTCCAGCT 001520 001521 CCCAAGCCCT GGAATTCTCC AAGTTTGGAG ATGTATTAGC AGAGGCTGAG AGTTGTTCAA AGTCCATCAA GGGAAGGCTG 001600 001601 TTCCCACTTT GGCTGTCAAG GAGGGTTCAA ATCCAGATGA GGGGCTGGGG ACAGGTGGGA GGGGAGAAGA AGGTGGTGAC 001680 001681 AACTTACAGG TGCCTCGTGC ATGGGAGAAC TTGATTTCTG TAGGTAAAAA GCAGAACCCA AGAGGTTTCT GATAAGGAGA 001760 001761 GTGATGATGG AGCATATAGA TCTGGCTCAA ATTCAGCCTC CATCACTTAC CAGTCAGGAA CCCTGGCGAT ATCACTTTAA 001840 001841 CTTTCTGAAC CTCAGAGTCT TCACCTATAA GACGGGGAAA ATAATACCAC CCTTTCAAGA TTGTTGAGAT AAATAAGTGA 001920 001921 TATAAAACAT GTAAAGCTTA GTTCTGGCCA CAGTGTAGCT ACTCAATAAA TGATAATACT AC |
Predicted Small Protein
Name | NONHSAT023191_smProtein_1763:1906 |
Length | 48 |
Molecular weight | 5652.4844 |
Aromaticity | 0.148936170213 |
Instability index | 46.870212766 |
Isoelectric point | 6.69622802734 |
Runs | 7 |
Runs residual | 0.0173404255319 |
Runs probability | 0.0493729023141 |
Amino acid sequence | MMEHIDLAQIQPPSLTSQEPWRYHFNFLNLRVFTYKTGKIIPPFQDC |
Secondary structure | LLLLLLLLLLLLLLLLLLLLHHHHHHHLLLEEEEELLLEEELLLLLL |
PRMN | - |
PiMo | - |