NONHSAT023786
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT023786 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
451 nt |
Genomic location |
chr11-:95512653..95516432 |
Exon number |
3 |
Exons |
95512653..95512851,95513043..95513090,95516229..95516432 |
Genome context |
|
Sequence |
000001 AAAGGTTGAT GGAAAGTTAT TATGCTGGCT CTGTACTTTA TCGTACAAAA GAGTTTTACA GAAGACGAAA GAACAAAGGA 000080
000081 AGAGCCTGGG ATCTTCACAT TCAAATTCAT CTTCTTCATC TCTTACTGAG AAAGACCAGC ATCATCCAAA Acatcatcac 000160 000161 caccatcatc accatcacca tcGTCACAGC AGTAGCCATC ACAAAATCAG CAATCTAAGT CCAGAAGAAG AGCAGGGACT 000240 000241 GTGGAAACAG AGCCATAAAT CCTCTGCAAC AATTCAGAAT GAAACTCCAA AGAAAAAGCC CAAATTGGAA TCTAAGCCAT 000320 000321 CTAATGGAGA TAGGTAAAAA TGAATTCTTT TAGTGTTATG AAAATTCAAC TTAGTTGAAT AGTTATGGTT GAATGCCAGT 000400 000401 TATTACTAGA TAAAAAAATA GAAACATGTA TTTTCTACAT TGACTTGAGT C |
Predicted Small Protein
Name | NONHSAT023786_smProtein_8:217 |
Length | 70 |
Molecular weight | 8056.4803 |
Aromaticity | 0.0869565217391 |
Instability index | 51.3494202899 |
Isoelectric point | 10.494934082 |
Runs | 12 |
Runs residual | 0.0345817190415 |
Runs probability | 0.0223164340811 |
Amino acid sequence | MESYYAGSVLYRTKEFYRRRKNKGRAWDLHIQIHLLHLLLRKTSIIQNIITTIITITIVT AVAITKSAI |
Secondary structure | LEEEELLLEEELLHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLEEEHH HHHHHHHLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHH HHHLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTT TTToooooo |