NONHSAT023830
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT023830 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1754 nt |
Genomic location |
chr11-:98435804..98437557 |
Exon number |
1 |
Exons |
98435804..98437557 |
Genome context |
|
Sequence |
000001 GATCAAGACC CAGAATCACT GACCCTGGAG GATGTGGCTG TTGAATTCAG CCGGGAGGAG TGGCAGCTCC TGGAACACTG 000080
000081 CTCAGAAGGA CCTGTACCAG GATGTGATGG TGGAGAACTC TAACCACCTG GTATCACTGG GGTATCAAAC TAGCAAACCA 000160 000161 GATGCACTCT CCAAGTTGGC GCATGGATGG GAACCATTGA AAACAGATGC TAAAGTCCAG AATAAAAATT GTCCAGGAAT 000240 000241 CAGGAAAGTT GACAGTCATC TGCAAGAGCA CTCTCCAAAC CAGTGATTTC TGAAGAGCAT GCAGCAATGC AGTGGACAGA 000320 000321 ATGCATTTAG AAATATTGTA CATCTCAGCA AGACACATTT TTCTCTAGTG CAAAATCATA ATACATTTGA CTTGTACAGA 000400 000401 AAAACATTGA AATCAATTTT AAGTTTAATC AACCAGAAGA GAAGACATGG AATAAATAAC CTTGTGGAGT TTATTGGAGG 000480 000481 TGAGAAAACC CTTCTACATG ATAAGCATGA ACATACGAAT ACTAAAACTA GATTTTCTGA AAATGCAAAT GGATCCATAC 000560 000561 TAAATTCCAA GTCTTTAAGC ATCAGAGGAC TCAGAAAATT GAGAAACTCC ATGCATTCAT TGAATGTGAG CAAACCTTCC 000640 000641 TCTGAAGTCT CAGCTCATTT ACCACGAGAA CATTCACATA GAAGAGAATC CTGGAGGTGG TCAATGTGAG AAATTGTCCA 000720 000721 GAAGTGTCCT GTTCACTAAG CATCTGAAAA CTAATATAGG GGACAAAATC TGTATACCCA ATCAATATAG AACAGGCTCT 000800 000801 ACTGTGAAGA GTATTCTCAT TGCACATCAA CAAACTTATA CAGAAGAGAA ATCCTATATG TACTGTGAGT GTGGAAAGGG 000880 000881 CTTTACAATG AAGCGCTATC TAATTGCTCA TCAGCGAACT TGTAGTGGAG AGAAACCTTA TGTGTGCAAT GAATGTGGAA 000960 000961 AAGGTTTCAC TGTGAAGATC AATCTCATTG TACATCAGTG AATTCATACA GGGGGAGAAA CCCTATATAT TCAGTGAATG 001040 001041 TAGAAAAGGC TTCACCCAGA AGCGCTACCT TGTTGTACAT CAGCAAACTC ATACTGGAGA GAGACCCCAT ATATGCAGTG 001120 001121 AATGTGGAAA AGGCTTTACT GTGAAGAGCA ATCTCATTGT ACATCAGTGC TCCCGTACAG GAGAAAAATC TTATATATGC 001200 001201 AGCTAATGTG GAAAAGCCTT CACTGTCAAA CGCACTCGCA TTATACATCA GTGAACTCAT ACAGGAGAGA AATCTTACAT 001280 001281 ATGCAATTAA TGTGGTAAAG GTTTCACCAC AAAGTGCACT CTTATTATAC ATCACCGAAC TCACACAGGA GAAAAACCTT 001360 001361 ATGAATGCAA TGACGTGGTA AAGCCTTCAG CCAGAAAATA TGGCTCATAC AATGTGAGAG ATGTCATACA GGAAAGAATC 001440 001441 CCTTTGTATG TACTGAGTGT GGAAAATCCT ATTCACACAA ATATAGTCTC ATTACCCATC AGAGAATTCA CACAGGAGAG 001520 001521 AAACCTTATG AGTGCAATGA ATGTGGAAAA GCCTTCACCA CAAAGTCAGT ACTCAATGTA CATCAAAGAA CGCATACAGG 001600 001601 AGAGAGGCCC TATGGATGCA GTGATTGTGA GAAAGGCTTC TTCCACTCAT CAAACCTTGT CAAATATAAG AAGATGCACA 001680 001681 CAAGAGAAAG GGGTAGAATC AGTCAAGTTG AAAATTCCTG TAATGGAGAG TCACAGCTCC TTCCTTACAA GTGA |
Predicted Small Protein
Name | NONHSAT023830_smProtein_1121:1297 |
Length | 59 |
Molecular weight | 7362.5941 |
Aromaticity | 0.137931034483 |
Instability index | 73.1137931034 |
Isoelectric point | 9.45391845703 |
Runs | 7 |
Runs residual | 0.035903751421 |
Runs probability | 0.0495116965705 |
Amino acid sequence | MWKRLYCEEQSHCTSVLPYRRKILYMQLMWKSLHCQTHSHYTSVNSYRREILHMQLMW |
Secondary structure | LLLEEELLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |