NONHSAT024330
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT024330 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
699 nt |
Genomic location |
chr11+:115812216..115813400 |
Exon number |
2 |
Exons |
115812216..115812484,115812971..115813400 |
Genome context |
|
Sequence |
000001 gcgtgcgtgt gtgtgtgtgt gtTGCTATCT CATAGCATCT GTTTATTTCC ATGTCCGCAG CAAAGTGCTG GGCACACAGA 000080
000081 AGGACAACGT GATGAAGCGC CATCACATGG CTGGTAGCCT GTGGTGAGTC ACCGGACTTC TCGACTCCCA CCTCACTAGG 000160 000161 GTGGAAGGAA CAGTAACCAC AACGCTCTGC AACTCGGGCT GCGCCCGCAT GATTGGAAAC AATCTGTGAA GTGAGTCACA 000240 000241 TCAGTTGCAA AAACAATTAA GTCAGTGGGA TTGTGGAGTG AACAACCCCG AAGAAATAGA CTTCTAATTC TAGCCTTttg 000320 000321 gagattatta acccaactcc cagattctac agatgagaaa agggaggccc agggaggtgg agaaacatgt gtaggatcac 000400 000401 agaggtgaaa aatgagtgtt tgcttggcta agttcaactg tacctacttg tctccagaga ctgctcAGGA ACTAGAACAC 000480 000481 CCTGATACAA CACAGGCACT TGTGATGGAG ATATTCCATC AAAAGTGGAA TAGGGCATGA AGGAGAATTA TCTCCTAAAA 000560 000561 GCTGGGAAGT TTCTCCTAAT CCTTTTTAGG GTGTCTTCCC TGTATCCCAA ATGCTCTTCA ACTGCCCAGG GCTCACGTCA 000640 000641 GTCTCCAAAG AACAGTGTCC CAAGTAGAGG GGAATGTGTA TGATGCCACG TTGGCTGAA |
Predicted Small Protein
Name | NONHSAT024330_smProtein_536:682 |
Length | 49 |
Molecular weight | 5320.1751 |
Aromaticity | 0.0833333333333 |
Instability index | 63.4770833333 |
Isoelectric point | 9.92279052734 |
Runs | 7 |
Runs residual | 0.0197368421053 |
Runs probability | 0.0326797385621 |
Amino acid sequence | MKENYLLKAGKFLLILFRVSSLYPKCSSTAQGSRQSPKNSVPSRGECV |
Secondary structure | LLHHHHHHHLLLEEEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLEEL |
PRMN | - |
PiMo | - |