NONHSAT025145
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT025145 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1795 nt |
Genomic location |
chr11-:130659126..130660920 |
Exon number |
1 |
Exons |
130659126..130660920 |
Genome context |
|
Sequence |
000001 tgcatgaaca aaatgaaaac ttcaccaaag agaaataata gaaaagaact aaacagaaat tctggagctc agcaatacaa 000080
000081 tgaatgaaat gaaaaatgtg atagagagcc tcaacagcag acttaagcag aagaactaat ctgcaaactc aaaATTAAGA 000160 000161 AGGTGCTGTC ACTCCCAGTT GCCAAGTCAA GCCCCGTCGA AGGAAAAGCA TGCATAGAAC CAAGCACAGC CAAAATTTCT 000240 000241 TTCCCAGGAT CAGCACCTCC TTCTGAGGCT GCAGACAAAG ACTGTCAAGG GACCCCATTA CTCCCTGTTG AAGTCTCAGA 000320 000321 GCTCATGGGT GTAGCTTCTT TGGTGTCAGG GGCTCTGGAT GCTAAGCCAG TAGAGAATCC TGAAGATCCT AGCCAACGGA 000400 000401 TTAATAAAAA CTGGAAGAAG GCAATTGTGA CATGGCAGGA ACAAACTGAG AGAATATTTA TATTTTGAAG TAGATGGATC 000480 000481 CAAACAAAGA AATGTGAATA AGATCAAGGA GTTTGGCTAG GGGTCTGAGA GACACTGTCA GACCAACCTG CATTTGAAAT 000560 000561 GGGCCAGTGT CTGAGTCATG ACAACATAAA GGTAAAGGTG CCCTGAATGT GCCCCTAGTC CCTGGGTCTG CTCTCGTCAC 000640 000641 CTCTTGTCAC TTCAGGAAGC AACAGCCAGG AGTGAAACAT GTAACCTGAG GTGGGAGGAA GGAATTTTTC AGAAGCTCTT 000720 000721 CCTGGACAAG GTGAGTCCTC ATGAACTGAT CCTGACCCCT ATGAACCCAT ACCCTATGAG CTCAACCTCC TAGATGAGGA 000800 000801 GCGTTCCACG AATAAGACCC ATATGTTAAG ATCCTGGAGC CTGAGGGATC AGGTGGCCTG ATGGGGCAGA CAGTTCTAAG 000880 000881 TTGCCTCCTG TTTTGGCCAA TCTTCTGGGA AGCATAGGTA CCTGGAAGGG TTTATTGAGA TCTGAAGAAG AAGGCATCAA 000960 000961 TGTCCAGGAG AGCCTTACTT TCATCATGGG TAGCCCAAAC AGTCAGCCCT CAAAATAACT TCTAAAACAA CCAGACTATT 001040 001041 CAGATAAGAT GACTGATTGC TCTTGCCACC TAACCTCTGA GGTCCTGGTT GAATAGTCCG TCGTTTCCTA CCAGGAGGCC 001120 001121 CTGGGAGGTC CAAAGACATT TTCCCCCTGG CACTGGCGAC CTATACCTGG TTTCTATGGA GGCTCTGGAG ACCCTGATGG 001200 001201 GCAGTTGATC CACATCTTCT GGGTCCCCCA ATCCCTCCAG TGAAAGATGA CCCCTTCTGG GATAGCCCAG GTGACCCCAT 001280 001281 GCAGGGTGGC CTAATATTGA GGGGAGAGTC AAGAACCAAT TCCTGGATCA TACCATAAAG CCTGTGGTGG CCAAAAAGAA 001360 001361 AATGAACCTT TCCCACCTCC TCCACTCTGA GGGGCCAGAG GAAGTCTCTC TGGAGTAGGA CCCCTAAATG GATGAAGAAA 001440 001441 TTCTGGTGGG ATCATTGTTA GAGTTGGTGG GCATCATCAC CAATAAGCAT CTCTTTCATG AAAGTACTGG TGGTGGCATA 001520 001521 AGTGGGGGCA GTGAAGATTT TTCATGAAGG TCCTGGACAT GGGGGATGCT GTGACCCCAA GCCTCATGAT GTCCCTGGTC 001600 001601 ACTGAGGCCA TGACCATCAA GGTCTGCCCT CTCGTGAGCA CTCTGGCCAT GATGGCCCTG GGCCACTGAG GTCAAGATGG 001680 001681 AAGCTACAGC CATGAAGGAG ACAGATCAAC CTGCTCTGTT TGCTGACATT TGATGATAAA GGGCAATGCC ACTATGAGAA 001760 001761 CAATTACGTC TTTTACCACC TGAGTGTCAA AGTCC |
Predicted Small Protein
Name | NONHSAT025145_smProtein_1427:1546 |
Length | 40 |
Molecular weight | 4089.491 |
Aromaticity | 0.0512820512821 |
Instability index | 41.6871794872 |
Isoelectric point | 4.24224853516 |
Runs | 7 |
Runs residual | 0.0107466063348 |
Runs probability | 0.0328059151588 |
Amino acid sequence | MDEEILVGSLLELVGIITNKHLFHESTGGGISGGSEDFS |
Secondary structure | LLLEEEEHHHHHHHHHEELLLEEEELLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |