NONHSAT026215
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT026215 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
564 nt |
Genomic location |
chr12-:7090703..7125778 |
Exon number |
2 |
Exons |
7090703..7091065,7125578..7125778 |
Genome context |
|
Sequence |
000001 ATTCGGGGCG CGCGGAGCTG GGGGGTCCCT GTGGGGCTCC CGGAGTTAAG ATGGCGTCCT CAGCGGAGGG GGACGAGGGG 000080
000081 ACTGTGGTGG CGCTGGCGGG GGTTCTGCAG TCGGGTTTCC AGGAGCTGAG CCTTAACAAG TTGGCGACGT CCCTGGGCGC 000160 000161 GTCAGAACAG GCGCTGCGGC TGATCATCTC CATCTTCCTG GGCCTACCTT CTGGCTGGAT ACTATTACAC TGCCACCGGC 000240 000241 AACTACGATA TCAAGTGGAC AATGCCACAT TGTGTTCTGA CTTTGAAGCT GATTGGTGAG TGATGGTCAC TGCCTGCCTT 000320 000321 CCTTACATGT AGGTCCCTCC CCCATCTCAC TAAAAACTTC CTCGGCACCC CCCCTCCGCC CCCCGCCATA CACTTCTGGC 000400 000401 TGCACTCAGT CTACAGGCCA CATCCTCAGT GTCCTCTCCC ACCACCCTAC CCATCCGTTC TCTCTCTGCT CAGGTTTGGC 000480 000481 TGTTGACTAC TTTGACGGAG GGAAAGATCA GGTAAGTACC CATTCATCGG CAGAGAGGTT CAAGACTTAA TGAAAGGGAA 000560 000561 GAAA |
Predicted Small Protein
Name | NONHSAT026215_smProtein_50:298 |
Length | 83 |
Molecular weight | 8834.9339 |
Aromaticity | 0.0731707317073 |
Instability index | 43.8402439024 |
Isoelectric point | 4.58941650391 |
Runs | 11 |
Runs residual | 0.00175535846268 |
Runs probability | 0.0455107513931 |
Amino acid sequence | MASSAEGDEGTVVALAGVLQSGFQELSLNKLATSLGASEQALRLIISIFLGLPSGWILLH CHRQLRYQVDNATLCSDFEADW |
Secondary structure | LLLLLLLLLLEEEHHHHHHHHHHHHHLHHHHHHHLLHHHHHHHHHHHHHHLLLLHHHHHH HHHHHHHEELLLLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLL LLLLLLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTii iiiiiiiiiiiiiiiiiiiiii |