NONHSAT027011
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT027011 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
883 nt |
Genomic location |
chr12+:13010017..13017612 |
Exon number |
2 |
Exons |
13010017..13010358,13017072..13017612 |
Genome context |
|
Sequence |
000001 TAATTATTAT TATTATCACC CCCAACCTCA AGCCATAATT CTGCCTGCCT CACCACCTTG AACCTCCCCA GAGAACTATT 000080
000081 AGCTGTTTAA CAATTTTCTC ATAGAGACTG TTAGGATTAA TCCCATCCTG CCTTATATCC TTTTTTACTT CAGTTACTAC 000160 000161 CTGAAGTCCA AGCAACCTAG AGAACAGTGT ATAATATGCT ATCATGGTGC TAAAACGAGT ATATTTGGCC AGGCACAGTA 000240 000241 GCTCATGCCT ATAATCCTAG CTCTTTGGGA GGCCAAGATG GGTGGATCGC TTGATTCTAG GAGTTTGGGA CCAGCCTGGG 000320 000321 CAACATGGCA AAACCATAGC TCTAAATGAG TTCAGAGGTG GCAGATGTTA ATGTCAGCTT ACGTTGAGGT AAGCCACAAA 000400 000401 TTCTCGTGTT TTTTTCAGAG TTCCCCATCA GGTGGAACAA AACTTGTCCT GTTACCTACC CTCAAAGACA AACCAGCAAC 000480 000481 CAGTTCACCA CCCATCCACC CTTTCAGTGT CTTCTTGTTG ATCTTTGGAG AAAGGCATGG CCTGGCAGGC TCTGCATGGT 000560 000561 GCCACAGGCC TATCTAGCTC CTGTCTCTCC TGCATTTCCT TCCCTACTGG CTGCTTTCAC TCTTTAAGCT CCTGCCCACC 000640 000641 CCAGGGACTT TGCACATGCT ATTTTTTCTA CCTCCTCTGC TCTTCTGCCC TCTTTATTTA GGCAACTTCT ACTCATCCTT 000720 000721 CAGATCCCAG GTCAAGCATA TCCTTCTTCA GGGAAGGTTT GCTTGACATC GCTGATGGGG TCAAATCCTC CTTTTAGAGG 000800 000801 CTATCACCAC ACGCTGCATC TGTATTTTAT AACACTTGTC ACAGTATTAT ATTTGTCTGG TTCTTTGATT GATATCTATT 000880 000881 ACT |
Predicted Small Protein
Name | NONHSAT027011_smProtein_536:700 |
Length | 55 |
Molecular weight | 5759.697 |
Aromaticity | 0.148148148148 |
Instability index | 67.7483333333 |
Isoelectric point | 6.65997314453 |
Runs | 9 |
Runs residual | 0.00397470641373 |
Runs probability | 0.0544956721426 |
Amino acid sequence | MAWQALHGATGLSSSCLSCISFPTGCFHSLSSCPPQGLCTCYFFYLLCSSALFI |
Secondary structure | LHHHHHHHHLLLLLLLLLEELLLLLLEELLLLLLLLLHHHHHHHHHHHHHHHLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHH |
PiMo | i????????????????????????????????????????????????????? |