NONHSAT027248
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT027248 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
813 nt |
Genomic location |
chr12+:21654715..21669165 |
Exon number |
3 |
Exons |
21654715..21654882,21665229..21665310,21668603..21669165 |
Genome context |
|
Sequence |
000001 AAAGCGGCAG TGAGGGTGGC TGCGTGTTTC CGGAAGACGT GGCGGCTCTC GCCTGGGCTG TTTCCCGGCT TCATTTCTCC 000080
000081 CGACTCAGCT TCCCACCCTG GGCTTTCCGA GGTGCTGTCG CCGCTGTCCC CACCACTGCA GCCATGATCT CCTTAACGGA 000160 000161 CACGCAGAGG GCTTCTTTCC TGTCGTTGTT GGCTTTATTA GAAGAGTGCC AGTCCTTGGA TCCCTCCTAA ATTTACCTGG 000240 000241 AATTAGATCA TTTGTAGATA AAGTTGGAGA AAGCAACAAT ATGGTATAAC AACAAGTGAA TTTGAAGACT CATTTAAAAT 000320 000321 ATTGTGTTAT TTATAAAGTC ATTTGAAGAA TATTCAGCAC AAAATTAAAT TACATGAAAT AGCTTGTAAT GTTCTTTACA 000400 000401 GGAGTTTAAA ACGTATAGCC TACAAAGTAC CAGCAGCAAA TTAGCAAAGA AGCAGTGAAA ACAGGCTTCT ACTCAAGTGA 000480 000481 ACTAAGAAGA AGTCAGCAAG CAAACTGAGA GAGGTGAAAT CCATGTTAAT GATGCTTAAG AAACTCTTGA AGGCTATTTG 000560 000561 TGTTGTTTTT CCACAATGTG CGAAACTCAG CCATCCTTAG AGAACTGTGG TGCCTGTTTC TTTTCTTTTT ATTTTGAAGG 000640 000641 CTCAGGAGCA TCCATAGGCA TTTGCTTTTT AGAAATGTCC ACTGCAATGG CAAAAATATT TCCAGTTGCA CTGTATCTCT 000720 000721 GGAAGTGATG CATGAATTCG ATTGGATTGT GTCATTTTAA AGTATTAAAA CCAAGGAAAC CCCAATTTTG ATGTATGGAT 000800 000801 TACTTTTTTT TGT |
Predicted Small Protein
Name | NONHSAT027248_smProtein_575:727 |
Length | 51 |
Molecular weight | 5541.46 |
Aromaticity | 0.18 |
Instability index | 47.6322 |
Isoelectric point | 4.49310302734 |
Runs | 8 |
Runs residual | 0.0046783625731 |
Runs probability | 0.0342474827769 |
Amino acid sequence | MCETQPSLENCGACFFSFYFEGSGASIGICFLEMSTAMAKIFPVALYLWK |
Secondary structure | LLLLLLLHHHHLLEEEEEEEELLLLEEHHHHHHHHHHHHHHHHHHHHHHL |
PRMN | LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLL |
PiMo | oooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTiiiiiii |