NONHSAT027377
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT027377 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1211 nt |
Genomic location |
chr12-:26107255..26110429 |
Exon number |
4 |
Exons |
26107255..26108174,26109160..26109280,26109572..26109697,26110386..26110429 |
Genome context |
|
Sequence |
000001 TCATTAGTTC CTTGACCTGC AGGTGGACTG AGAAGAGAGC CATGCAGGTA GCAGGCAAGA GTGTGGTTAT CGTTGGACCA 000080
000081 GGATTCAGGA TCTGACTGAG TAGCTGACTC TTAATCCAGT TTGTGTTGAT CACCAGGAGG ATCTGGACCT CAGTATTACC 000160 000161 ACATCTAGAG CTATAATCAC ATCCCTGTTA AGCCTTCCTG AGATCACACC AAATGTCCTT GATGGGAATT GTAAACAACC 000240 000241 CTTACTTCTG GTTTCTAATG ATATTCCAGG AAAGGAGCCT AACTAGAGTC Agtgatatgc caactccacc tttgccttcc 000320 000321 accatgtttg gaagctccct gaggcctcac caggagcaga tgctcgtccc atgcttccta taagcctgca gaactgtgag 000400 000401 ccataataaa ctgtgaatta taaattgcct ttatagcaat gcaaatggac cagtacaGAT GGGATGCTGG GAAGACAGTT 000480 000481 GTTTCCACCT TCAGTAAAGT CCGTGGAACA CAGTTGTGAC TATATTCTAG GCCAGCCAAG ATGCTTGTAC TCAGAAAGGA 000560 000561 GTGGTCTCAG GACCATAAGA AAGTGAAAAA ATAAAAATAA GAAAATAAAG AAGGGATTGT CAATGAATCA GAATTCATCA 000640 000641 AGGTCAAAGT CTTAGGAAAT TCCTTCATGA GGAAGTCTAG GGGGGCTATG GAAATGAAAT TTTTAAACAA ATAGGTATGT 000720 000721 GGTGCTGGCA GGAATAAATT ATGGACTTAT GAATATAACA TAAGATTCTT TATTACCTGG TCTCACCCGT CTTTCCACCT 000800 000801 CTGCCCCCCT TCTTGCCCGA CTCTGTGTAT CACCCATAAT AAACTACTTA CAGCTTCCTA GTGttaaatt taccctaaag 000880 000881 ctgcctcctt caatatttta agtttaacct aaaggttctt catacatagt gaactataac ccaatgatta aacagattgt 000960 000961 aacctactct tgtaccagtc accaagtttc agccaatcag aggtggccaa ctgttcaaac catgctcaaa taagggaaat 001040 001041 gtcatggtgt aactaatcca gctgtttcta taccttactt ctgttttctt aggtcacttt ccttttttgt ccataaattc 001120 001121 tctccaacca ctcagcagca ctggagtcac tccaaagcta tcctggttca ggggtctgtc tgattcacaa gtcattcttt 001200 001201 gttcaattga g |
Predicted Small Protein
Name | NONHSAT027377_smProtein_212:382 |
Length | 57 |
Molecular weight | 6520.6868 |
Aromaticity | 0.125 |
Instability index | 62.8607142857 |
Isoelectric point | 6.51190185547 |
Runs | 10 |
Runs residual | 0.0252732240437 |
Runs probability | 0.0383324500973 |
Amino acid sequence | MSLMGIVNNPYFWFLMIFQERSLTRVSDMPTPPLPSTMFGSSLRPHQEQMLVPCFL |
Secondary structure | LLEEEEELLLHHHEEEEELLLLLEEELLLLLLLLLLLLLLLLLLLLLLEEEELLLL |
PRMN | - |
PiMo | - |