NONHSAT027435
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT027435 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
966 nt |
Genomic location |
chr12-:27599430..27610684 |
Exon number |
3 |
Exons |
27599430..27599567,27606194..27606691,27610355..27610684 |
Genome context |
|
Sequence |
000001 TGACTTTGTA CAGAAATCAG GAAGATGCTT TGAAAGAAAC ACTGTGCAAT GAAAGTGCCA CTGATGTGTC TAGCATTGAC 000080
000081 ATGCTTTTGG CTGCAAAGAC TTGAGCCCAC ACGTTGCCTG AAACCTTCAG TCCTTTGAAG CTGTGATTTC AAGACCCAGA 000160 000161 TGTTGACAGC TGCTCAGAAT GCTTCTCAGG AAGAGGCTGG GACTTCCAAG ACCCCATTCC TGGGTTGGGT GATGAGTGGT 000240 000241 TCTGATACTG TGAAAACTCA CAAAAGACTA TGTAATGATA CCAACCACGT GAGACTATTT TGAGAATTAA ATGAGTTAAT 000320 000321 ATATGCAAGA TTTGTGCCAC ATTTGCTGTA CTTACTTGAA TTCAGCTCCC TGGGGCAGGG ACTAAAGGGT AAGCCAAGAA 000400 000401 GGCTGACAGA AGCTCAGCAA AAACATCTGG AGGGATGGAG GCTGGGGATA GAGGGAGGAG AGGCAACCAT ATCGGCCAAC 000480 000481 ATTCTGTCTC CTTTCACTCT TTCTACTTCC TTTTGTTCAG ACAGTTCATT TTAGTGAGGC CTCAGGCATT TTTGAAATTC 000560 000561 TGCAGCGTGG GGAGCTGCCA GGGTCAGCCT TTCTGTTCTT TCATGTCTGA GCATATGTGA CAGTTTTTCA GAGAATATAT 000640 000641 ATAAGAGAAT GTTCCATTCT CTAGTTGGGC TTTCATCCAA GGTATAGATT TTCAGAGCTG TGGACACAGC CACTGAAATA 000720 000721 GCACTCACAT GCCCCGGCAC AGGATGGGGC AGCAGCTTTT ATCTCAGTAG GCTCTGGTTA GAATGGTCTT TTCATAATGA 000800 000801 TAAACCTTTG AACAACAGGG AGTGTACCGA GGATCAACAT CATCTTGATA GAGTCCCATA GTGTCTCAAA GTGGGGAGGT 000880 000881 TAGGATGCTG GTTAGTCATG GAGTATTTTC AGAGTGGAAG TTGATCAGTG ACGTTTTGTC AGGGATTGAT CCAATTTATA 000960 000961 AACTAG |
Predicted Small Protein
Name | NONHSAT027435_smProtein_434:619 |
Length | 62 |
Molecular weight | 7059.0651 |
Aromaticity | 0.16393442623 |
Instability index | 54.5198360656 |
Isoelectric point | 9.14935302734 |
Runs | 10 |
Runs residual | 0.0111173921236 |
Runs probability | 0.03650415121 |
Amino acid sequence | MEAGDRGRRGNHIGQHSVSFHSFYFLLFRQFILVRPQAFLKFCSVGSCQGQPFCSFMSEH M |
Secondary structure | LLLLLLLLLLLLLLLEEEHHHHHHHHHHHHEEEELLLLEEEEEELLLLLLLEEEHHHLLL L |
PRMN | LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLL L |
PiMo | iiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooooooooooooo o |