NONHSAT027915
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT027915 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
592 nt |
Genomic location |
chr12-:47675474..47695977 |
Exon number |
3 |
Exons |
47675474..47675902,47679793..47679904,47695927..47695977 |
Genome context |
|
Sequence |
000001 ACATACCAAA CCAGGTTACC ATGACATTAT GTGTTGAAAC TACTGATAAA Ggttcaactg attcttgtgc ctcagcctcc 000080
000081 ccaagtagct gggattacag ctacttttgc accaccacgc ccagctaagt tttgtatttt tagtagagac agggtttcac 000160 000161 catGTTGACT AGGAGCTACT ACTACATTAG AAACGAGAGT CTCAGAAGCC TTATCTTAGT CAATATGCAg atcttggcag 000240 000241 tcactgagct gctacttcag ttttttcatc tgtaaaaAAG CAGCCAAGAG TCCAGGGCAC CCACCCCATG GACACATTAA 000320 000321 CTGTGAACAC TGCCAGAACC ATTTTTCAAT ACTGTAATTC TCCTCCTGGT CAGTTTTTGC TCCTAGACAG CTGACAACAC 000400 000401 GTTTCCTTCC ATGGCCTCAG TGTAACTTTT AGATGATTCG CTCAAGCTCA TAAACTGACT CAGTCTTACC ACCCAACCTC 000480 000481 ATTTCTCTCC ACCCATTGCC AGGATGAATT CTCACCTGTG GTaatgctct ccagctggag gccaccagga acacactgta 000560 000561 taggttgagt ttactactca cagccagggc aa |
Predicted Small Protein
Name | NONHSAT027915_smProtein_161:274 |
Length | 38 |
Molecular weight | 4503.3333 |
Aromaticity | 0.135135135135 |
Instability index | 71.9540540541 |
Isoelectric point | 8.27398681641 |
Runs | 6 |
Runs residual | 0.017604760724 |
Runs probability | 0.0386563033623 |
Amino acid sequence | MLTRSYYYIRNESLRSLILVNMQILAVTELLLQFFHL |
Secondary structure | LLLLLEEHHHHHLHHHHHHHHHHHHHHHHHHHHHHHL |
PRMN | LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLL |
PiMo | iiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooo |