NONHSAT028137
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT028137 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
484 nt |
Genomic location |
chr12+:50152919..50156877 |
Exon number |
3 |
Exons |
50152919..50153104,50155487..50155562,50156656..50156877 |
Genome context |
|
Sequence |
000001 AGTGACTATG AGCCAGAAAG TATGGCTGGT TTTTTTTTCT CTGCAACTTC TGCTGTATAG TAACTTCATC TCTTACATTT 000080
000081 GTTAGGCAAA CCTGTATGTG GGACTGGTGG TCATGTGTGG CTTCGTCCTT TTTGATACTC AACTCATTAT TGAAAAGGCC 000160 000161 GAACATGGAG ATCAAGATTA TATCTGGCAC TGCATTGATC TCTTCTTAGA TTTCATTACT GTCTTCAGAA AACTCATGAT 000240 000241 GATCCTGGCC ATGAATGAAA AGGATAAGAA GAAAGAGAAG AAATGAAGTG ACCATCCAGC CTTTCCCAAT TAGACTTCCT 000320 000321 CTCCTTCCAC CCCTCATTTC CTTTTTGCAC ACATTACAGG TGGTGTGTTC TGTGATAATG AAAAGCATCA GAAAAGCTTT 000400 000401 TGTACTTTGT GGTTTCCTCT ATTTTGAATT TTTTGATCAA AAAACTGATT AGCAGAATAT AGTTTGGAGT TTGGCTTCAT 000480 000481 CTTC |
Predicted Small Protein
Name | NONHSAT028137_smProtein_254:451 |
Length | 66 |
Molecular weight | 7796.3868 |
Aromaticity | 0.123076923077 |
Instability index | 60.4661538462 |
Isoelectric point | 10.5951538086 |
Runs | 9 |
Runs residual | 0.0118269230769 |
Runs probability | 0.0265854089384 |
Amino acid sequence | MKRIRRKRRNEVTIQPFPIRLPLLPPLISFLHTLQVVCSVIMKSIRKAFVLCGFLYFEFF DQKTD |
Secondary structure | LLLLHHHLLLEEEELLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHLLEEEEEEE ELLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL LLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTToooooooooooooo ooooo |