NONHSAT028489
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT028489 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
733 nt |
Genomic location |
chr12-:54118367..54121236 |
Exon number |
2 |
Exons |
54118367..54119050,54121188..54121236 |
Genome context |
|
Sequence |
000001 GTTTTTGTTG TTGGTGAAAG GTGAGGGGAA CAGCTGATCC GTCTGTTGGG AGGACAGATA TCTCAAGGCC AGGATGGAAG 000080
000081 AATCACCACT AAGCCGGGCA CCATCCCGTG GTGGAGTCAA CTTTCTCAAT GTAGCCCGGA CCTACATCCC CAACACCAAG 000160 000161 GTGGAATGTC ACTACACCCT TCCCCCAGGC ACCATGCCCA GTGCCAGTGA CTGGATTGGC ATCTTCAAGG TATCTCTGGA 000240 000241 ACCCCTTTTG GCTTAGGTTT ATGGGCTGTG AGTTGGTTGG AATAAGGGGA ATGATTGGGC TCTTGGATTC TCAACCTCAG 000320 000321 GTTGATAGAG AAGAAGAGAG AAAGATGTCA CAGATGACAG AGGCCGCCTG TATAACCAAA GCACATATTT TCTCCATCTT 000400 000401 AGCCTTGTTC TTTACTGACA CATTAGTGTC CCTCCACTTT CCCTTTCTCT TGTCATTGTT GCCACTGTAG CTCCATCCTG 000480 000481 CCCCCCTTAT TCAACCCCTC AGCCCTTTCT TCCATCCATA GAAGGTAGTT CCATGACCAT ACCTTTCTCC AACCTTGGGC 000560 000561 TTTCACAGGT GGAGGCTGCC TGTGTTCGGG ATTACCACAC ATTTGTGTGG TCTTCCGTGC CTGAAAGTAC AACTGATGGT 000640 000641 TCCCCCATTC ACACCAGTGT CCAGTTCCAA GGTACAAGGG AAGATGGAAA ATTGGGAGAG AGGAGCCAAG GGAGTGGAGG 000720 000721 TTTGAAAGAA GGT |
Predicted Small Protein
Name | NONHSAT028489_smProtein_260:469 |
Length | 70 |
Molecular weight | 7724.0909 |
Aromaticity | 0.0724637681159 |
Instability index | 57.6623188406 |
Isoelectric point | 5.07952880859 |
Runs | 11 |
Runs residual | 0.0200889654183 |
Runs probability | 0.0476305182188 |
Amino acid sequence | MGCELVGIRGMIGLLDSQPQVDREEERKMSQMTEAACITKAHIFSILALFFTDTLVSLHF PFLLSLLPL |
Secondary structure | LLEEEEEEELEELLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLHHHHHLH HHHHHHLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHH HLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTT Toooooooo |