NONHSAT028694
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT028694 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1041 nt |
Genomic location |
chr12+:56224473..56225686 |
Exon number |
2 |
Exons |
56224473..56224867,56225041..56225686 |
Genome context |
|
Sequence |
000001 CTCTTACCTG CTATATAGTT GGGGGTCTCT GGTCCTGGAC TAGAGCAGTA GGCAACCTGG GTCCCCCCAC ACACACGGGA 000080
000081 AAGAATTGGA GGGGCCTGCC TTGTGATGTC ACCCCTCCTC CCCCCACcgc gcgcacgcgc gcgcgcacac acacaaacac 000160 000161 aaacacacac cccaacacac acgcCCTGTC CCCTTTCTCC ACCCTGCAAG CTAGTTGCAT TTAGCTCACA GAGCCTGGGC 000240 000241 TGCGACTTGA AAGAGTTTAG GCAGCAACAG AGTGACCCTG GGGGTGCTCT TGACCGACAG CCGCACCCCC GGCGTCTAGG 000320 000321 ACCTCCGAGC AGGGATGCAT CTGGAGGTCT AGGGAAGCAC TTCCACCCCC TCCTCTCCTC AATCCTGGCA GGATGTGCCC 000400 000401 GAAATGCCAG CTCCTCCTTG GTGTTCTCCT TTCAGGATTT GAATTCAAAT CCCATTGGCA GCCCTGATAC CGCTGGGGGA 000480 000481 AGGGTGAGGT AGGAAAAGTC CCACCAATAT CCTAAGGGGA GGTGCGAGTG GCTACCAGGA TGTGAGATGT CTGTGGGCAA 000560 000561 AGTCCCTGCT TATTCCATGA GGGGCTGTGG GATTAGGACT GTGGCTGGAT GCCTCTTCCT CCAACAACTC CATCTCAGCA 000640 000641 TGAAGCTGAG GCTTTAAAAC CCTGACAAAC TGTGGGTGAC TGTCTCTACT TAATTCCTCC TCCCAAACTC TTGGTGTCTG 000720 000721 GTTTTTTCCC TCTTTCTGCC CTGGGCCTGG AGCAGCTGTC CAGAGACCCC CACCATGACT CATACTCTCC TGTTCTCCCT 000800 000801 CCCTCTCCCC TCTCTATTAA CCTCACCCTT CCCAATCCAG TGGGGTAGTA TTAAGTCCCA GTCGCAGATG GGGCAATAAT 000880 000881 GTCCCAGCAC CCCTCCCTCC ACACACCCAG GGCTTCCTGT TCTTTCCACC CTCACCCTGA AGAGCTGCAG GGTGGTGGGG 000960 000961 GGAGGCAAAG GCTCATTACT TTATAAGATT TTCATTACTT TATAAGATTT CATTTTACAT TTTACTTAAG TGTACTTGTT 001040 001041 T |
Predicted Small Protein
Name | NONHSAT028694_smProtein_878:985 |
Length | 36 |
Molecular weight | 3863.3068 |
Aromaticity | 0.0285714285714 |
Instability index | 75.4857142857 |
Isoelectric point | 8.08245849609 |
Runs | 5 |
Runs residual | 0.0382566585956 |
Runs probability | 0.0384737678856 |
Amino acid sequence | MSQHPSLHTPRASCSFHPHPEELQGGGGRQRLITL |
Secondary structure | LLLLLLLLLLLLLLLLLLLHHHHLLLLLLEEEEEL |
PRMN | - |
PiMo | - |