NONHSAT029469

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT029469

Source

NONCODE4.0

Same with

,

Classification

sense

Length

574 nt

Genomic location

chr12+:72668289..72703543

Exon number

5

Exons

72668289..72668366,72680461..72680734,72696945..72697020,72700442..72700524,72703481..72703543

Genome context

Sequence
000001 aattaacctt ttcctgaCAT GACTACTTCT AGTGCTTATT GCACGCCCAT GTactcaatc cgacaagaac cctatgagAT 000080
000081 TCCTTGGTGT TACTCAGTTT TCGCCTACAC ATGCCAGAAA GGCATTTCCT TGTTTTGATG AGCCAATCTA CAAGGCTACT 000160
000161 TTCAAAATCA GCATCAAGCA TCAAGCAACC TATTTATCTT TATCTAATAT GCCAGTGGAA ACTTCCGTGT TTGAGGAAGA 000240
000241 TGGATGGGTT ACGGATCACT TTTCACAGAC CCCTCTCATG TCCACATATT ATTTAGCCTG GGCAATTTGC AACTTCACAT 000320
000321 ACAGAGAAAC TACCACCAAG AGTGGGGTTG TAataaacgt ggacccaaat gcaatgagaa gaaacctagt atatatcact 000400
000401 aGAGATGTTA GGAATTAAAA CAAAAGGGgg actgttctag gcactgggga cacagcagta aataaaatgg gcaaagcttc 000480
000481 atgaagctta cattgtttct attccagtgg gTTGCTCTTT GTGGCCAGGA TGTAGCAGAA AAATAAAAAA AAGAAGATGG 000560
000561 AGTTTTTTGA TACT
[back to top]

Predicted Small Protein

Name NONHSAT029469_smProtein_110:295
Length 62
Molecular weight 7196.6672
Aromaticity 0.0819672131148
Instability index 82.7032786885
Isoelectric point 10.0546264648
Runs 11
Runs residual 0.0275108347466
Runs probability 0.0376419199948
Amino acid sequence MPERHFLVLMSQSTRLLSKSASSIKQPIYLYLICQWKLPCLRKMDGLRITFHRPLSCPHI
I
Secondary structure LLLLEEEEEELLLHHHHHHLLLLLLLLEEEEEELLLLLLHHHHLLLLEEEELLLLLLLLL
L
PRMN -
PiMo -