NONHSAT029784

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT029784

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1888 nt

Genomic location

chr12+:88435485..88442200

Exon number

5

Exons

88435485..88436697,88437376..88437492,88439359..88439556,88440584..88440753,88442011..88442200

Genome context

Sequence
000001 AACGATAATA CAGTTTTAAT CTGGTTCTTC ATATTATTTA TCTGGATAGC TAATAAGTAG TACAGAATAT TTGGACCACT 000080
000081 GTGCAGCAGT TTCTTTATAA ACCTTGGATT TGTATACTTG AGAAAACTGT AAAAGATTTT TTAGACTTTG ATGTCTATTA 000160
000161 AGAAACTATA GTGTGTATCA TTATGCGTGA GGACGGCAAA CTGGGTTAGA ATTTAACTGC TAAACTCAAG TCACAGAACC 000240
000241 CAAAGTGACA ATGCTTACAA ATCCACATTT ATTACTACTA AAGAATTACT ACTAAATTAT TACTACTAAG GCATTAAAAG 000320
000321 TAAAGATGTG TATTATAGCC AAGGACTGTC TCACAGTAAG GAGTATGGAG AGGCCAAGTA AAAGCTACTA TTGTTCCCTG 000400
000401 CTTTAGAGCC TTGGCAGGAC ACATTTTCTT AGATCAGGAA CCACTTATGT GTGCAGGCAA ACAGCTTGGA ACCAGGGAAT 000480
000481 GCAAAATGGA CTCACAGCTG GAGATTTTTA TATTTTTGCT GGTCACGTAG GTAGGCAGCT GATGCTCAGC TTCAACAGCA 000560
000561 GAGCCCTCCA GGGTTCTCAG ACCAAGCTAT CAGTCTCACT CCTACCAATA AAGAATACTA GCACAGTGCC CTGCAACTCC 000640
000641 TCAGATCCAT GAGTACAAAT CAACATTATT AGTATTTTCA TGCCTTGATC AGGGGTCAGT GCCATGCAGA ACAGCTCAGC 000720
000721 CTGATTCCAG ATGTGTCAGA ATTAACCCTT ACAGCACAGT GTTATGTTTG GGGGGAAGGG GTGGGGTAAA TACAGTTATC 000800
000801 TGGTTATGTT TCCATTTTGA AGAGGTAGCT TCAGTTGTCC ATAAATGCTG CTAACTCATA CAATATGACT ATGCAGTGTC 000880
000881 CTTATAAAAA AGATCATATA TTTACTTTTT GTCTCATCCC CCTCATTCTT TAACCAGAGA AATAAGTCTT CTCATAGCAT 000960
000961 CAGGTACTGC TAGGAGGTAT ATATTCTTAG ACTCCATATT TCCCTTTGTC TTCTTTGAGA AATTAGCCTC CTGTTTGTTG 001040
001041 ACAAACTGTA TTCTGAAATG TCTTTCAAGA TAAGTTTTGT TTGCATCATA CTTTTCCTTT TGTTATTACT TTTTTAGATC 001120
001121 AGCCATACCT TTGGGCTCGA CTAGATAGAA AACCCAACAA ACAAGCTGAA AAAAGATTTA AAAATTTTCT ACATTCAAAA 001200
001201 GAAAACCCAA AAGaattttt ttGGAACGTT GAGGAGGACT TCAAACCAGC TCCGGAGTGC TGGATACCAG CAAAGGAGAC 001280
001281 AGAACAAATA AATGGGAACC CAGTGCCTGA TGAAAATGGA CACATTCCTG GTTGGGTACC AGTAGAGAAA AACAACAAAC 001360
001361 AGTATTGCTG GCATTCCTCT GTAGTTAATT ATGAATTTGA AATTGCCCTG GTACTAAAAC ATCATCCTGA TGATTCTGGA 001440
001441 CTTTTGGAAA TTAGTGCAGT GCCACTTTCA GATCTCTTAG AACAAACACT GGAACTCATA GGAACAAATA TCAATGGAAA 001520
001521 CCCATATGGG TTAGGGAGCA AGAAACATCC ATTACATCTT CTTATACCAC ATGGAGCATT TCAAATAAGA AATCTACCTT 001600
001601 CATTGAAGCA CAATGATCTC GTGTCCTGGT TTGAAGATTG CAAAGAGGGT AAAATTGAAG GAATAGTGTG GCATTGCAGT 001680
001681 GATGGCTGTT TAATAAAGGT CCATCGCCAT CATCTTGGCT TATGCTGGCC AATTCCAGAT ACTTACATGA ATTCAAGACC 001760
001761 AGTTATTATC AACATGAACC TGAACAAATG TGACTCTGCC TTTGATATTA AGTGTTTGTT TAATCATTTT TTAAAAATAG 001840
001841 ATAATCAGAA ATTTGTTAGA CTCAAAGATA TAATATTTGA TGTATAAA
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Predicted Small Protein

Name NONHSAT029784_smProtein_446:529
Length 28
Molecular weight 3075.687
Aromaticity 0.0740740740741
Instability index 58.7
Isoelectric point 5.93267822266
Runs 5
Runs residual 0.0214707461084
Runs probability 0.0365836424661
Amino acid sequence MCAGKQLGTRECKMDSQLEIFIFLLVT
Secondary structure LLLLLLLLLLEELLHHHHHHHHHHHLL
PRMN -
PiMo -