NONHSAT030067
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT030067 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
892 nt |
Genomic location |
chr12-:96675517..96677411 |
Exon number |
2 |
Exons |
96675517..96676377,96677381..96677411 |
Genome context |
|
Sequence |
000001 AGGAATTGAG TTGATAACAA AATTTCTTCA GTATGAATCT AAGAAAAGGG TTTCAGCTGA AGAGGCCATG AAACATGTGT 000080
000081 ACTTTCGAAG TCTGGGACCA AGAATACATG CTTTACCAGA AAGTAAGAGA AATCCTAAAG TGTTTTCCCT GCTTTATTTT 000160 000161 TATTTGTCCA AGGTTAGGGT CTGGGGTGAT TGGGGAGATG GCTATTGATT TTTAAGCCTA AGATTCTAGT CTTCTCTATA 000240 000241 GTTAGATTAG AATTTCTTGA AGGGAGGTGT GTGTCTTATT TCCCTATGAT TCAGTTATTT CTTGTAACAC TGAGCACATT 000320 000321 GTCACTCCTC TGTAGGAAAC CAATAGTACT TAGGCAAGGA TCATTAATCT TATTGGACTT TAGTTGAAAC ATGCCATCTG 000400 000401 ATGACAGGCA TTGTCCCTAG GCCCAATCTA GCTTCGATTT AGCGTTGTTA AAAGTGAATT TCAAACAAAA ACTAATGAAG 000480 000481 CATAACCGAA ACATAAATTG TTTTCTTGTG AAAATACATT TTTTCTTAAG ATACAAAGAT GATTTTCCTT TATTGTGGTC 000560 000561 ACACTGACTT TACTATCCCC ATGACAGCAG TGAGCATATT GTCAAAGTCA CTGTAATAGC AGATTTCCCA TGCCTGAATA 000640 000641 ACATTGATTT TACTCTTAAC ATTCTATTTT TAGATTACCA CAGTATTTTA CTTTAAAATA GAGTAAGGTG AGTGGGGAAT 000720 000721 TAGAAGAATG TTTGGGAACT AAGCTGCCAA AAGCTTTCAT TAATTTCCTA TTCTCATTTA TTAGACAATA TTGATTCATC 000800 000801 AAAGCTTGTG TAGCAGTCAG TGACAAAGCT AATTGGAATA AAAAATCCTT AATACTTTTC ACTTCAACTT TACTGGATAT 000880 000881 ATTTAAATGA AA |
Predicted Small Protein
Name | NONHSAT030067_smProtein_74:214 |
Length | 47 |
Molecular weight | 5471.5026 |
Aromaticity | 0.173913043478 |
Instability index | 42.4739130435 |
Isoelectric point | 4.65582275391 |
Runs | 9 |
Runs residual | 0.0342908902692 |
Runs probability | 0.0572042630866 |
Amino acid sequence | MCTFEVWDQEYMLYQKVREILKCFPCFIFICPRLGSGVIGEMAIDF |
Secondary structure | LLEEEELLHHHHHHHHHHHHHHHLLLEEEEELLLLLLLEEEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooo |