NONHSAT030443
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT030443 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
529 nt |
Genomic location |
chr12-:105597201..105601767 |
Exon number |
3 |
Exons |
105597201..105597563,105600839..105600985,105601749..105601767 |
Genome context |
|
Sequence |
000001 GAAAAAGGAG AATGAGAAGG TGAAGACCGA AGTCGGAAAA GAGGTGGCCG CGGCCCGGCG GAAGCAGCAC CTCTCCTCCC 000080
000081 TTCAGTACTA CTGTGCCCTC AACGCGCTGC AGTACAGAAA GCAAATGGCC ATGATGGAGC CCATGATAGG CTTTGCCCAT 000160 000161 GGACAGATTA ACTTTTTTAA GAAGGGAGCA GAGATGTTTT CCAAACGTAT GGACAGCTTT TTATCCTCCG TTGCAGACAT 000240 000241 GGTTCAAAGG TAATGCTGCA CTCCGGCCGG GTCTTGTGTG CCCCTTGCCT TTCATGCTGA TCTGACATCT CTGGGAGGTC 000320 000321 ACGGGGAGGG TTCTAACTGT GGAGGGTCGC ACAGAGCCTC TGTCCACCCC AGAAATGCTC GCTAACAGTG CCCTTGCCTT 000400 000401 AGCTGCCAAT ATTCATAAAT ATCTGGGGCA CATTGGCAGA GTTTTCTCCA GATCTCTTGT TGTGAATATT GGAGTTTCAC 000480 000481 ATGTCACAAG CCTGGGAACC CAGCTTAGCT TTGCTGTGGT TTTAGAAGA |
Predicted Small Protein
Name | NONHSAT030443_smProtein_158:304 |
Length | 49 |
Molecular weight | 5712.7829 |
Aromaticity | 0.166666666667 |
Instability index | 62.060625 |
Isoelectric point | 10.0819702148 |
Runs | 9 |
Runs residual | 0.0219298245614 |
Runs probability | 0.0358888300066 |
Amino acid sequence | MDRLTFLRREQRCFPNVWTAFYPPLQTWFKGNAALRPGLVCPLPFMLI |
Secondary structure | LLHHHHHHHHHHLLLLEEELLLLLHHHHHLLLLLLLLLLLLLLLLEEL |
PRMN | - |
PiMo | - |