NONHSAT030618

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT030618

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1439 nt

Genomic location

chr12-:110171418..110174503

Exon number

4

Exons

110171418..110172398,110173396..110173626,110173967..110174101,110174412..110174503

Genome context

Sequence
000001 GACAGattaa acaccaacta tgtgccaggc caggccctgt gctagatgct ggggCAGTGA CAGACCCTGA GTGGATGGGA 000080
000081 GGCATCAGAG GGGTAAGTAG GAAAAAGCTA GGGGAAGGGA AGGATCCCAC AGAAGGGACT GCACAGGCCA CCACATGGAG 000160
000161 ACTTGAGAGA GAGGAGCAAA CAGAGAACAT GAAGGAGCTC CAGGCTGCTG GAGAGCAAAC CCTCCTGCAA AGAATGAGTG 000240
000241 GGGAGATCTG AGAATCGATA CTGAACAGCT TCAGTACTAC GATGTCATAA TGGGGCTGTG AGCTCAGCCG AAAGCCCCCC 000320
000321 GCCCAGTTTT TTTTGGAAGT GGTCATAGAA TCTCTCTGGA GAAACAACAT GGAAATGGAG ACCAAAAGAG GGAAGGAGGG 000400
000401 ATGCCACCAG ATGACACTGG GATCCCGGAA GACGGAACAC TGTGTGCAAC GGGCAAAGAA CTTTTCAAAA GGGATTTCAA 000480
000481 CCTCTGACCA CCTGGAGACA GGCGACTGGC GCTCATTGTA AATGCACCGA CATGACAGGG AACAGCTGCT GGGGAGGTGG 000560
000561 AGACGGGTGC CGGGAGAGAC AGGAAACCCC AGAGGCTTGG AAATCCAGGA GCCACAGGAA GCAGTGAGCT TTCTGCGGAG 000640
000641 CCGGATCCGG TGGAGccaat tcaccagcag gtcccggcag caactcttct acaacagatt cctgcccgtc cctgtgcccc 000720
000721 atcgcccccc tgccgtcaat ctccacctca agggagccag accaagcctt tctgtgtgta gcgcacatct ctcctgcgta 000800
000801 gagctcacct agtggcttcc atagcttttt tttttttttt tttggagaca gggtcttgcc ctgtcaccca ggctggggta 000880
000881 cggtggcatg atcatggctc actgcagctc cctcctgggc tcaagtgatc ctcctgcctc aacctctcaa gtagctggga 000960
000961 ctacagttgt gcaccacccc acccagctaa ttattatttt ttgtagatgt gggatcttgc tatgttgccc aggctggtct 001040
001041 tgaactcctg gcctcaagca accttctcac ttcagcctcc ctaagtgctg gaattatagg tatgagccat cccgccagtc 001120
001121 ttccgtggct tttctaacaa tatccttgaa ggacctctgt gaatcccttt cccaatgtct atctgcactg tccctgtccc 001200
001201 aggctgatcc tgctcagaca cgctggcttg ctttctggtc ctctcacaag ccaaccctgt ccccacccca gggcctttgc 001280
001281 acttatggtt ttgcctctac ctaaaTACCC TATACcagtg ctgtctgata gaaatatgta ataatggggg ccgggcgtgg 001360
001361 tggctcacac ctgtaatccc agcacttttg ggaggccgag atgggcagat cacgaggaca ggagatcgag accatcctg
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Predicted Small Protein

Name NONHSAT030618_smProtein_521:811
Length 97
Molecular weight 11176.6864
Aromaticity 0.0729166666667
Instability index 89.4469791667
Isoelectric point 11.4495239258
Runs 17
Runs residual 0.0428479381443
Runs probability 0.0466972162474
Amino acid sequence MHRHDREQLLGRWRRVPGETGNPRGLEIQEPQEAVSFLRSRIRWSQFTSRSRQQLFYNRF
LPVPVPHRPPAVNLHLKGARPSLSVCSAHLSCVELT
Secondary structure LLLLHHHHHHHLLLLLLLLLLLLLLLEELLHHHHHHHHHHHLHHHHLLLLHHHHHHHHLL
LLLLLLLLLHHHLLLLLLLLLLLLEEELEEEEEEEL
PRMN -
PiMo -