NONHSAT030982
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT030982 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1304 nt |
Genomic location |
chr12+:117538207..117540765 |
Exon number |
2 |
Exons |
117538207..117538445,117539701..117540765 |
Genome context |
|
Sequence |
000001 TGGGGCCGAT GCTGTTGCCT GTGTAATGTG ATTCCTCCTC CTTAAAATAA GGATAAGTTA ATGAGATGTC CACCAGAGGG 000080
000081 CCTGGCGTGG ACACAGCACA TGGCCACAGA GGCTGGTGGG CGCTATGGAA TCTTGTCCCC TGGAGAGGCA CACAGCCAGG 000160 000161 GCAGAACATC AAGGTCAAGG CTCTCCTGAA GGCTCTGCAG TGCTTAGTGA CACCACCATC AATGACCGTC AGGTATCAGa 000240 000241 cctcagtgga aactcacatc ctcagggagg ccttctcaga gtcctcatcc cctctcctgg gtccACAGCC AAACAAGCCA 000320 000321 CCACCACCAG TCAGCAGGGA GCTGGGAGGC GGGAAGTCTT GCTGAGGATG ACAGAGGAGG ATTTATTCCT AATAGCAGGG 000400 000401 CTTGGAGAAG TAATCAGGAG ATCCTTGGAG CAGCACGAAG GCAGAAAAAA CCAAGGCACA ATTTATGCAT TCGTTCAAtc 000480 000481 atttattcat tgcacattta ttgagcacct actatgttca gggctcttgc taggtcctgg agccacagcc aggaataaga 000560 000561 tgccaccttc gctcctgaag aactcctggt ggggtgagga gacagacaca cgggcagtga caaagcagat gggtaaacaa 000640 000641 gggctgACGT GATGGAGCCC ACAGAGAGAT GGAATGTTCA AACCAGAATG GGCCCCTGGA GAGACTCTGT CATCCCTAAA 000720 000721 GCTGAGCTTC AGGAAGTCCA GGACTGTCCC CAACTGTGGT CCCGAAGGGA TACAGCAAAG CCAAATTCTT GGTGGACAGA 000800 000801 TGTCTCTGTG GGGGCCCCTG CAGTGGCACC CACCATCTGC CCGGGCTCTG CCCTCCTCTG GCAATGATGT GCACACCGCA 000880 000881 AGGCGCCCTC CACGCAAAGC CAGCTGCTGC CTGTTCCGGG ACGTCATGGC TTTCATTCAA ACCTACCAAT GGCTCTGCAG 000960 000961 GCGTCAACAA AGCAAGAAGC AAGAATGAGG TCTGCAGCTT TGCATGGGGT CTGGCCAGGG CTCATTGGAT TTTTTGTCTA 001040 001041 GAGCCCTGGA AGAGGGGCAC CCTGCTGGGG GGCAAGCTTT ATCCCCCCCA ATAACACAGC ATGACTTTTG GAGGACTGGG 001120 001121 AAACACTTTA GTCACCAGGC AACTGCGTCT TTTCTCCCAG AGGACCTCCT CCTGGAGGAG CTGATTAAAA GTGGTGACCG 001200 001201 CAATTCATAT AGCTGGTCCC TGTCAAGCCG Caaagagcag ctgagcccag agatggccag gatggtcttc atttggctct 001280 001281 cccaccttcc tgtcatggag ggct |
Predicted Small Protein
Name | NONHSAT030982_smProtein_65:364 |
Length | 100 |
Molecular weight | 10780.2866 |
Aromaticity | 0.0606060606061 |
Instability index | 60.9292929293 |
Isoelectric point | 10.0311889648 |
Runs | 10 |
Runs residual | 0.0326797385621 |
Runs probability | 0.0459547783077 |
Amino acid sequence | MSTRGPGVDTAHGHRGWWALWNLVPWRGTQPGQNIKVKALLKALQCLVTPPSMTVRYQTS VETHILREAFSESSSPLLGPQPNKPPPPVSRELGGGKSC |
Secondary structure | LLLLLLLLLLLLLLLHHHHHHHLLLLLLLLLLLLHHHHHHHHHHHHHLLLLLLEEEEEEL LLEEEHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |