NONHSAT031476

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT031476

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2087 nt

Genomic location

chr12+:122352124..122354549

Exon number

2

Exons

122352124..122353850,122354190..122354549

Genome context

Sequence
000001 GTACTCCCCC TGCtttaatt ttaatttttt aaattaaaGT ACTATATACA ggctgggtgt ggtggctcat gcctgtaatc 000080
000081 ccagcacttt gggaggctga ggtgggtgga tcacctgaga tcaggagttc aagaccagcc tggccaacat ggcgaaaccc 000160
000161 catctctatt aaaaatacaa aaattatctg ggcatggtgg cacgtgcctg taatcccagt tgctcaggag gctgaggcag 000240
000241 gagaattgct tgaaccgggg aggcggaggt tgcagtgagc cgagattgtg ccactgtact ccagcctgcg cgacagagaa 000320
000321 cccatctcaa aaaaaagaaa GTAATACATA CATgccaggt gtggtggcac atgcccaaaa tcccagcact ttgggatgct 000400
000401 gaggtgggca gatcacttga gcccaggagt ttgagaccag gctggccagt atggtgaaac cctgtctcta ctaaatatac 000480
000481 agaaacatta gctgagcatg gtgctgcatg cctgtagtcc cagctactca ggaggctgag gcacgagaat tgcttgaacc 000560
000561 taggaggctg aggttgcggt gagctgagat tgcaccacta cactccagcc tgggcaacag agcaagactc tgtctcagaa 000640
000641 aaataaaGCA ATACATACGC ATGGTTAAAA AATTAATGAT ATGGAAATAT ATAAAAGTAA ACATCTTCTT TTTCCAAAGG 000720
000721 ACTAGTCCTC TCTGGAAGTA ACCACTCTTA ACAAGTTTTT CCATGTTCTT CCAGAAAACT TCGCACACTA GAGCAACACA 000800
000801 GGTGTCCTTT TAGAAAATAT TATCggccgg gcacggtggc tcacacctgt aatcccagca ctttgggagg ctgaggtggg 000880
000881 tggatcacct gagatcagga gttctgagac cagcctggcc aacatggcga aaccctgtct ctactaaaaa tactaaaatt 000960
000961 aggcgggtgt ggtggcgggc acctgtagtc ccagctactc aggaggctgg ggcatgagaa ttgctagaac ctgggaagca 001040
001041 gaggttgcag tgagccaaga ttgtgccact gcactccagc ctgggtgaca gagtgagact gtgtctcaaa aaaaaaaaaa 001120
001121 aagaaagaaa aTATTATCAA ATAGGTTCAT ACTTTGGTGG GGTTTTGGTT TGTTTTGACT AAAACCCTTC ATTCTCTGTA 001200
001201 CTGTATTTGA ACAATAccta ttgatggaca tttctggtgt tttcagtttt tgaatttcta cacagtcctg gaatgaacat 001280
001281 ttcatttgta tgtctcGCTA ATTTTTATAC TTTTTGTAGA GTGCTGGGAT TACAGGCATT TGTATGTCTT GTAATTTGTA 001360
001361 TGTCATCTTG CAATTGTGTA CTATGTACCT TGGATGTACC TTTTAAAGAT CGTTGGTGGT GGGACACGTG TTTTTTGAGG 001440
001441 AAGATGGTAC TGAGGTCAGC ACCCTGGCTG CCCTGAGAGT GCagtgccac gttccccacc ctctcgccaa ccacaggatt 001520
001521 atgctgcaaa tgtaaatctt taccaatttg ataggcaaaa aatgggatct cagcatttta gcctgcatct ctgagtacta 001600
001601 acgaggctga acaCGAAATG AGCTTATTTT CTTTTCAGAA GCCCCTGAAT GTGACAGTGA TCCGCAGGGG GGAAAAACAC 001680
001681 CAGCTTAGAC TTGTTCCAAC ACGCTGGGCA GGAAAAGGAC TGCTGGGCTG CAACATTATT CCTCTGCAAA GATGATTGTC 001760
001761 CCTGGGGAAC AGTAACAGGA AAGCATCTTC CCTTGCCCTG GACTTGGGTC TAGGGATTTC CAACTTGTCT TCTCTCCCTG 001840
001841 AAGCATAAGG ATCTGGAAGA GGCTTGTAAC CTGAACTTCT GTGTGGTGGC AGTACTGTGG CCCACCAGTG TAATCTCCCT 001920
001921 GGATTAAGGC ATTCTTAAAA ACTTAGGCTT GGCCTCTTTC ACAAATTAGG CCACGGCCCT AAATAGGAAT TCCCTGGATT 002000
002001 GTGGGCAAGT GGGCGGAAGT TATTCTGGCA GGTACTGGTG TGattattat tattattttt aataaaGAGT TTTACAGTGC 002080
002081 TGATATG
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Predicted Small Protein

Name NONHSAT031476_smProtein_68:277
Length 70
Molecular weight 7876.0233
Aromaticity 0.0869565217391
Instability index 85.1188405797
Isoelectric point 8.36334228516
Runs 10
Runs residual 0.00559621179509
Runs probability 0.047270800212
Amino acid sequence MPVIPALWEAEVGGSPEIRSSRPAWPTWRNPISIKNTKIIWAWWHVPVIPVAQEAEAGEL
LEPGRRRLQ
Secondary structure LLLLLHHHEELLLLLLLLLLLLLLLLLLLLLLEELLLLEEEEEELLLLLLHHHHHHHHHH
LLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLL
LLLLLLLLL
PiMo oooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiii
iiiiiiiii