NONHSAT031494
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT031494 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
663 nt |
Genomic location |
chr12+:122688276..122693499 |
Exon number |
3 |
Exons |
122688276..122688348,122692243..122692359,122693027..122693499 |
Genome context |
|
Sequence |
000001 CCGCGCACCT GGGCGCCATC CGCCCTGGCT CCGCTGCACG AGCTCCACGC CCGTACCCCG GCGTCACGCT CAGATGCAAA 000080
000081 CAAAATCTTA CACTCTTCTC CTTTGGATAC AATAGAGAAA CGGAAAGAAA GGAAGGAACA AGAGGCCTGT GTTAAGTCCT 000160 000161 GTTGATGTTA AGTCCTGTTG AGAGCACCAG CTTGGTTTCT GCTTTCCGGG AGAGCTGGTG CACCTCTTCC ACCTGCAGTT 000240 000241 TCACCAGCTG AATGTGATTC CTGGCGGTTA TAGAGGCCTG ATCTGCGCCT GCCAAAAGAT GGGACAATCG GGTTGAGCAG 000320 000321 CCGTGCAGGG CGCGGAAGGC TCATGTGGAC GTTGGCCTGG GGGTGCTGTG GCTGTCATCT GAACCCCTCT TGGGGTCACT 000400 000401 TTCCTTGACC TCCCTGTCTT CTCTCTCTGC AAAGAAACTT CCACCTCTAT GTTCAGGTCT GGATTTAACT GACACTCTGT 000480 000481 CAAAAACAGC ATTTTTCTTC AGCTGTCAGC GGCCAACATC ACAATTATTA AATGCAACTC TCACAATCAT CTTTATAGCT 000560 000561 ACAGAGCTTT TAGTACAGAC CTTTGATTAA TTTTTTTAAC TACACATCTT CCATTTCTTT TTGACAAAGA GATCATGAAT 000640 000641 AAAATTGTCA AAGATCCCTT TCA |
Predicted Small Protein
Name | NONHSAT031494_smProtein_164:250 |
Length | 29 |
Molecular weight | 3031.3499 |
Aromaticity | 0.107142857143 |
Instability index | 64.4928571429 |
Isoelectric point | 4.52960205078 |
Runs | 6 |
Runs residual | 0.0110663983903 |
Runs probability | 0.0244656421127 |
Amino acid sequence | MLSPVESTSLVSAFRESWCTSSTCSFTS |
Secondary structure | LLLLLLLLHHHHHHHHEEEELLLEEELL |
PRMN | - |
PiMo | - |