NONHSAT031821

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT031821

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2221 nt

Genomic location

chr12+:127221553..127230800

Exon number

4

Exons

127221553..127221702,127227286..127228026,127229316..127229434,127229552..127230800

Genome context

Sequence
000001 GGGGTGGGGT TCATCCCACC CAGACCACAG AGACTGAAAA TAAGAAAGGG GTGAGGCCTA AGGGACAATC AGGATGTTTT 000080
000081 TCAGAGAGAA GTGTGGATGC TGGACAGGAA GAACCACAGA TACCAGATAC GGGACATACT TTATTCAGCT GGGTGCTGAA 000160
000161 AAAGAATCTT GGAAATTAGG AAACTGAATG AGGCCTCATT TCACACTCAG AATGTGGGTT GCAATAGTCA CTTCCTCTGC 000240
000241 TGCTGGGAAA GAAAGAATTA TACTACCTTT TGAATTTTGG ATTAAGGAGA GAGGTGTTGG CTTGTCAAAC TACCATGTAT 000320
000321 TCCTCAAGAC ATATTTTTGT GGCTTTATAA AATTCAATAT ATATGTCTAA ATTCAAAAAT ATTTTGTTGC AATCTGGCCC 000400
000401 TTGGACAAAC TGAGGCCCTA GCAACTGATG TTTATGGCTT TCCGTAGAAC CTTTCAGATA AAATTTACAC AGCATTTTAC 000480
000481 TGCAGCTATT TCACACAAAG CAGAGGATTT TGCCACAAAA CTGAAAGAAA AAAGAAACTG CATTCTTAAA TTTTTCATAA 000560
000561 ATCAAAAGGT ATAAAAATAT CTACCTAAAC GATAAAGGAG ATGAGAAACC CCACCCATGA TGGGAAGAAA GCCTATTTCA 000640
000641 GTTTTGCCTT TACTTCAAGT TCTTTTTTCC ATATCTGGAA TGCAATCAGA ATTTTAATCT TGCCTTGGGT TCCTCCTGGA 000720
000721 TTTGGGGAGA AGACAAAACC TGAAAATCTC TAATCTGCAT GTGTTCAGCT GCGTATCTTC TGGATACGGA AGGATCACAC 000800
000801 TGCACAGAGT GCTGGACTTG CAGGAGCCCC GCTTCTCAAC CTCCATCGCT TTATGAATGA ATTCACCAGA AAGAAAAGGA 000880
000881 AGAATCAACA CTTTCAGAGA TGGAGCCTGT TGAGCCACAG TACCAACTAG TCAATGCTGA ATCGACTTCT CCCTTTCTAC 000960
000961 ATTGCCTGAG AGAAGTCATT GGGGAATACT CTAGAGTCAA GGGATTGGAT TGTGGATTGC ATTGGTGGTT TTCCTCAGTT 001040
001041 TCCTCATCTT CTCCACAAGT TTCTACATAT CGAATGCAGA GCAGCCCTTC TTCAAAGGAC CTCCTACGGA AGCTGCTAAG 001120
001121 GAACTCAGTC TGTAGCTCTG CGTGGAGCCA TGTGTAAACA CTGAACTGAG ACCTGCCACC TCCTACTACC TAAGGGCCCA 001200
001201 TTTTCATCTG ATATCATCCC CCAGAAACAA ACTCATGATG ACTTCCATGT TTTTTTTAGA TTAGATACAT GGAGAATTTT 001280
001281 CCTTTCCCTT AGAATTAAAA TCCTGCATTC TAATTTTCAG TAAGCTTTTT TATTTCTGAA TAATTTTAAA TTTAAAGAGA 001360
001361 AGTTGCAAAG ATAGTATAGA ATGTTCCCTT ATACCTGTTT TTATTTAGAG TGATGTTCCC AGGAGAAATG ATAATGCAGC 001440
001441 AATGGACAAG AACAGGAACA AGAGACAGTC TTACCATCTT CTTACAATTT ATAGATGGGA CAGTGGAAAG AGAAGCCACA 001520
001521 TCGGGGTTGG GCATGCAGAG ACCTGGTCCT AAATCTGTGT GACTTTTGCG AAATCCTTTT GCCTCACAGA GCTCTAGGTT 001600
001601 CTTATCTGTC AAACAGGAAC CAGACCATCA GATCCGTAGA GATCCAACCA ATGAAGGAGA CTTCGAAAAC TTCACATTGC 001680
001681 CGTGTCAATG TGAGGTTGCT GGATGGTTAT GACAAGAAAT CACATTAAAT TCACTGGGGT AACATTGTTC ATGAAACGGG 001760
001761 ATAATGTGTT TCAGCGATGA ACCACCCATG GCCTTACTAC AGACATATTT CCACTTTGAA AATGTGTGTG AGTGTACATG 001840
001841 TCTGTGTGTG AGGCAGAGAT TAGAAAGTGT AAATGTGTGC GTTTTCATTT TACACATCTT ACATTTTCCT TTAATTTGTT 001920
001921 TGAAAGCCTG TTTTGTTTGT GGCTTCCATT CCTGGAAGTC CCATGAGTTG TTAGTGGTGA AGATGGAACA GATGTGTCCA 002000
002001 ACCCGGGGGA CTCCTGCCCT CAGGGACTGA GCAGCTGCAA ACCTCTCTCT CATCTGATTC CACTGTTTCT TCCACATGTA 002080
002081 CACATCATGA GAAATATTGT TCAATCAATA TCTTCCCTTA AATCAACTCA TATGCTTATT TACATGAATT TACCTAAAAC 002160
002161 AGAAACTTGA TATCACTTCT GTAAATGAAA AAATTAAACT TTCTGGCTTT AAATAAAGCA T
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Predicted Small Protein

Name NONHSAT031821_smProtein_1763:2029
Length 89
Molecular weight 10209.1273
Aromaticity 0.102272727273
Instability index 57.6852272727
Isoelectric point 6.48455810547
Runs 14
Runs residual 0.0277272727273
Runs probability 0.0528427587251
Amino acid sequence MCFSDEPPMALLQTYFHFENVCECTCLCVRQRLESVNVCVFILHILHFPLICLKACFVCG
FHSWKSHELLVVKMEQMCPTRGTPALRD
Secondary structure LLLLLLLHHHHHHHHHHHHLLLLEEEEEEEEEEELLLEEEEHHHHHLLLHHHHHHEEEEL
LLLLLLLEEEEEEHHHLLLLLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHH
HHLLLLLLLLLLLLLLLLLLLLLLLLLL
PiMo oooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTT
TTiiiiiiiiiiiiiiiiiiiiiiiiii