NONHSAT032078
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT032078 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
968 nt |
Genomic location |
chr12+:132855758..132856878 |
Exon number |
2 |
Exons |
132855758..132856700,132856854..132856878 |
Genome context |
|
Sequence |
000001 CTACAACGCG GATTTATTCT TATTTCCCAC AGGGAAGGCC TAACAaggct tgaccaatca gtgaagggca ttccccagac 000080
000081 tgctggctgt gactgggtcc cagataagca cgtgacccac tatgggccaa tgaaagtcgc ctgagacttt tgctTGCATG 000160 000161 GTTGCTGGGA CGGTCCAAAG TCCTCAGTGG GGACGGCTGG CTGCAGCTGT CAGACTTGGA GCGTGAGGAC AGAGCTGGGC 000240 000241 CGGTTCCTCC CTGGGATCTC CCCTCCCCGA GCACAGGctc tgctctgccc agccccatgc tgtcccctgt gcgaccgctg 000320 000321 tgggcttcct gccaggctcc tgcaccctcc ggcttctgtt gggttcagtt ctgggaggca gccccggagt ctggagggtg 000400 000401 gaaggagtga ggggcatccc ctgtcccctc cccacagtct tggcagtggt ttcttctctc cagagttact gtccctaccc 000480 000481 cctgtcctct ctctgcagct ccagctcttg ctgggcgcct gtgattctca cccctgtccc ttcaggccgt ggggAGAAGA 000560 000561 ACATCCCAGT GCGGTCACTT CCTGGATCCA ATTCCTGGAT GCCCAGTGTC CGCCGGGTCT CCTGGATTCA CCGTGGTCAC 000640 000641 TGCCTGGATG CCCAGTGTCC ACTGGGTCTC CTGGATCCAA TTCCTGGATG CCCAGTGTCC GCCAGGTCTC CTGGATTCAC 000720 000721 TGTGGTCCCT GCCTGGATGC CCAGTGTCCT CCAGGTCTCC TGGATTCACT TCCTGAATGC CCAGTGTCTG CTAGGTCTCC 000800 000801 TGGATCCACT TCCTGGATGC CCAGTGTCTG CCAAATCTCC TGAATTCACT TCCTGGATGC CCAGTGTCCA CCAGGTCTCC 000880 000881 TGGATTCTGC CTGTGTCCAC GTGAGGGCAC CATCAATTTC CTGCAAGGAT CCTGACAGTC AAGGATGGCC AGCAGTAAGG 000960 000961 GGTTTCGT |
Predicted Small Protein
Name | NONHSAT032078_smProtein_647:775 |
Length | 43 |
Molecular weight | 4587.2165 |
Aromaticity | 0.119047619048 |
Instability index | 81.7595238095 |
Isoelectric point | 5.19366455078 |
Runs | 6 |
Runs residual | 0.0333031946956 |
Runs probability | 0.0381263616558 |
Amino acid sequence | MPSVHWVSWIQFLDAQCPPGLLDSLWSLPGCPVSSRSPGFTS |
Secondary structure | LLLEEEEEEHHHLLLLLLLLLLLHHHHLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |