NONHSAT032562
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT032562 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
770 nt |
Genomic location |
chr13-:25514740..25542625 |
Exon number |
5 |
Exons |
25514740..25514923,25516125..25516246,25517070..25517159,25525535..25525626,25542344..25542625 |
Genome context |
|
Sequence |
000001 gctctctgct gccccaggaa tgggctgatt tcctgagtac acattaatct gagctccctc agccctaggg gtagggggat 000080
000081 tgggggcaca agatgggtgg agccagatag ggaagattcc cccagtgttg tcctgctccc agtccaggtt tgggacaatg 000160 000161 ccggcagcgt ttccctgtgt ctttccccca caaagtctcc aagtctttcc tcaaatgatc gtcaaggttt gggagaaaca 000240 000241 atctcttcct ctgcccgggt tgcgtggatc tccagtggaa agGCTTTATC TACCAAGAAA TGAATTGGAT AATCCACATA 000320 000321 AACAAAAAGC TTGGAAAATT TATCCACCAG AATTTGCCGT GGAGATACTT TTTGGTATGG TTTCTGTGGA TTCTCTGCTC 000400 000401 TTTGTGCTCT CCTCCCCACA TTGGTGGCTC CATCTGGCAC AGGGAAGCTT CTGGATGTCA GAAGgtggat tctcactctg 000480 000481 tcacccaggc tggagtgtag tggcacaatc tttgctcact tcaacctctg ccttctgcgt tcgagcaatt ctcctgcctc 000560 000561 agcctcccga gtaactggga ttacagGGAC AGTAAGTGGT GTTTCCTGGG AGATGCTACG GTGTTATTTT TGCACTACAA 000640 000641 GGGCTCTGAA GACTGCCAGG CTTGAAGTGA AGAACCACGT CACCTGCCTA TCCCAGCCAG GTGACAGTGG ACAAGGGGCT 000720 000721 TCACCTCTGA GCTGTTTTCC AGCTGTACTG GGCACATTCC TCCTCTCACC |
Predicted Small Protein
Name | NONHSAT032562_smProtein_299:499 |
Length | 67 |
Molecular weight | 7685.9364 |
Aromaticity | 0.136363636364 |
Instability index | 45.0090909091 |
Isoelectric point | 9.35430908203 |
Runs | 12 |
Runs residual | 0.0312103066594 |
Runs probability | 0.0537670022965 |
Amino acid sequence | MNWIIHINKKLGKFIHQNLPWRYFLVWFLWILCSLCSPPHIGGSIWHREASGCQKVDSHS VTQAGV |
Secondary structure | LLEEEEHHHHHLHHHHHLLLHHHHHHHHHHHHHHHLLLLLLLLLEEEELLLLLEEELLLL LLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLL LLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTooooooooooooooooooo oooooo |