NONHSAT034477

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT034477

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1753 nt

Genomic location

chr13+:79980444..79997090

Exon number

6

Exons

79980444..79980612,79986817..79987042,79989246..79989499,79991970..79992051,79994895..79994950,79996122..79997090

Genome context

Sequence
000001 GGAGAATGCG CGGGTCGAGT GCTGTAGTTC GATTTTTGCG TGTGTGCGTT GCTTGCGGCC TTTGTGCCTT TTTATTCTTT 000080
000081 GCTTACCTTT ATGATATAAA GACCTTATTT CTTACAAGGA GGAAAAGACC GCTGACTTCA GAAACAGCGG GAACCCCAGC 000160
000161 TCGTCCCCGG TAATTCAAGA GGAAACGCTT GAGCAATTAC TGATGTTGTA AACTGGGATC AGAAGACATA CATGGTATCG 000240
000241 TATCCCAGGC AAGGCACAGT GGCTCACACC TGTAATCCCA GCACTTTGGG AGGCTGAAGA AGGCAGATCA CTTGAGGTCA 000320
000321 GGAGTTCGAG ACCAGCCTGG CTTACATGGT GAAACCCATC TCTACTGAAC ATACAAAAAT TAGCTGGACA TGATGGTTAG 000400
000401 CTGCACCTCT ACTCCACGTG TTCCTCCCTT CAGGTCCCAG GCTGATGGAG TAGCCTCTGT GTGTTTGGGA TGTTGTCAGT 000480
000481 CATAATGGTG GACACAAAAG AGATTATGAC AAACCGTGTA TTGTCTCCTA CAATTTCTGC TCACAGAAGT GGACAACATC 000560
000561 ACTTCTTTCC ACATTTCATT GACCAGAGCA AGTCATGTGA CCAAGCCTGA TTCAAAATAG GCTGGAGCAA GGAGGAGCAG 000640
000641 CAAACATAAC ATTCCCAGTT TACAGCTGAG GAAATTAAGC TTCAAGTTGC CCAAGTTTAT AGAATGAGTC AATGGCAGAG 000720
000721 GTTGAACTCA GATGACAAAA TTGGGGTCTG GACGTGTGCA AGGACTTTTC CAAAGTCAGC TGGAAAGGAG CTGCTTAGCT 000800
000801 GAGAGGTTCT GGCTCCAGAG TCTCCTGTGA AGTTGCAGTC AAGATGTCTG CTGGGACCCC AGTCATTTGA AGCCCTGTCT 000880
000881 GGGGCAGGAG AATCTAGGTC CAAAATGGCC GTTGCAGGAG TCCTTATCCA CACCATGTGG GACCTCTTCA TAGATGTTCG 000960
000961 AGTGTCCTCA TGGCATGGCC ACTGGCTTTC CCCAAAGTAA GCAGTCCAAA AGAGGGTAAG ACAGAGCCCA CACTGTCTTT 001040
001041 TATGAATTAG CCTTAGAAGT CTAACACGGT TACTTCCACC ACATTCATTA GTCGTTAGGT ACAGCTCACA TTCATGGGGA 001120
001121 GGAAAATCAG GGCCTGTCTT TAGATAGGAG ATGTATCAAA GAATTTGTGG ACATATTTTA AAATCACAGC ACTACTCTTG 001200
001201 ATGTACTAAG TCAGTGACTC CCCCAGGAGT CTCACAGAGA ATTGACTCCT TGCCCACCTA TACTACCTTT GTGGGTAGAG 001280
001281 ACTCCAGTAG TGTGCTGGTT AATGTTCAAC CAGTGGCTTT CTAGAAAACA AAATGTATGG ATACATATAT ATGTTCTAAG 001360
001361 TTTTACTGAT ATGAAGAATG TGTAGCACAG AATTTATAAA TAATAAAATA TACAGTATTA TTTATTGTAA ATTCCATAAA 001440
001441 ACCTGTTGTT TTTCACAAAA GGTTTTAGTT TATTTTTCCC AAATGCTTGT ATTGGTAACA TTTTCTGTAT TACCTTTTTA 001520
001521 TGTCCAGACA ATCAACAAAA CTGAAAAAGC CCAGCCTTGT AGCATTTGCC AGTTATTGTG TAAATGTCCC CACTATGGTG 001600
001601 GATTTCAGGT TACCACTATG ATATCACAGA ATGCAGAATT GGAAGGAGAT TCACAGCAGC ACCCCATTAT ACTATATTTT 001680
001681 CACCATACAG ATGCAGTCGA TGTAAATTAC CTGAGGAGCA TAAATAATAA TAAAATGAAG TTAAATAATT CGG
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Predicted Small Protein

Name NONHSAT034477_smProtein_5:172
Length 56
Molecular weight 6228.3901
Aromaticity 0.127272727273
Instability index 50.7218181818
Isoelectric point 10.8535766602
Runs 6
Runs residual 0.0424242424242
Runs probability 0.0241859506566
Amino acid sequence MRGSSAVVRFLRVCVACGLCAFLFFAYLYDIKTLFLTRRKRPLTSETAGTPARPR
Secondary structure LLLLHHHHHHHHHHHHHHHHHHHHHHHHHLHHHHHEEELLLLLLLLLLLLLLLLL
PRMN LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLL
PiMo ooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiii