NONHSAT034772
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT034772 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1137 nt |
Genomic location |
chr13+:96346823..96347959 |
Exon number |
1 |
Exons |
96346823..96347959 |
Genome context |
|
Sequence |
000001 ATGATTAATA TACATAAAAT ACACCCACta attaaaatta taaattattc atttattGAT CTCCCCACAC CATCCAACAT 000080
000081 CTCTACATGA TGAAATTTTG GCTCACTTCT TGGTGCCTGC TTAATTCTCC AGACCATCAC AGGATTATTT CTGGCCATAC 000160 000161 ACTACACACC GGACACCTTA ACTGCTTTCT CTTCAGTTGC CCATATCAAC CGAGTTGTAA ACTACGGCAG AATAGTCCAC 000240 000241 TATTTTCACG CTAACGGTGC TTCAATATTC TTCATCTGCC TCTTCCTGCA CGTTGGCCAA GGTTTATATT ATGGGTCACT 000320 000321 TATGTCCCTA GAAACCTGAA ATACTGGTAT TATCCTCCTA CTCAACAACT ATAGCAACAG CGTTTATAGG CTACATACTC 000400 000401 CCATGAGGCC AAATATCATT CTGAGGCGCT ACAGTAATTA CAAATCTATT ATCAGCCATT CCATATATTG GAACGGATCT 000480 000481 TGTTCAATGA ATCTGAGGTG GGTTCTCAGT TGATAAAGCC ACTATTGCAT GACTTTTCAC CTTCCATTTT ATCCTACCCT 000560 000561 TCATCATTAT AGCCGTAGCA ATTCTCCACC TTTTATTCTT GCATGAAACA GGATCCAGTA ACCCTTCAGG AATTTCATCA 000640 000641 GATTCCAACA AAATCACCTT CCACCCTTAC TATACAACCA AAGATATCCT AGGTCTAATA TTTCTCCTCC TCCTTCTAAT 000720 000721 AACTCTAGTA TTATTTTGAC CTGACTTCCC GAGCAATCCA GACAATTACA CTTTAGCCAA CCCCCTCAGT ATCCTACCCC 000800 000801 ACATTAAGCC AGAATGATAT TTTTTGTTTG CATACACAAT CTTACGATCC ATCCCTAATA AACTAGAAGG TGTACTGGCC 000880 000881 CTTCTATTCT CTATTCTATT CTAGCAGTTA TTCTTGTACT ACATACGTTC AAACAACAAA GCATAATATT CTGCCCATTA 000960 000961 AGTCAATGCC TGTTCTGAAT TTTAGTGGCG GACTTGCTTA CAGTCACATG AATCAGATGA TAGCCAGTTG AACATCCTTT 001040 001041 TGTTACCATC GGACAGCCAG CATCTATTAT GTAATTCTCC ATTTTCCTTG CCCTTATACC ACTCACTGCC CTAATTGAAA 001120 001121 ATAAGCTACT TAAATGA |
Predicted Small Protein
Name | NONHSAT034772_smProtein_86:253 |
Length | 56 |
Molecular weight | 6488.5111 |
Aromaticity | 0.127272727273 |
Instability index | 56.16 |
Isoelectric point | 9.24664306641 |
Runs | 8 |
Runs residual | 0.00606060606061 |
Runs probability | 0.0407171877761 |
Amino acid sequence | MMKFWLTSWCLLNSPDHHRIISGHTLHTGHLNCFLFSCPYQPSCKLRQNSPLFSR |
Secondary structure | LLLEEEEHHHLLLLLLLLEEELLLLLLLLLLLEEEEELLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |