NONHSAT035116
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT035116 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
474 nt |
Genomic location |
chr13+:110380621..110382381 |
Exon number |
3 |
Exons |
110380621..110380892,110381380..110381539,110382305..110382381 |
Genome context |
|
Sequence |
000001 AATCCTCCAC GATAGTCCAC AGGATGTACT GGGAGAAACT GGAAGGCCAC AGGAGAAACG TTTGCTCACG AAAACACAGG 000080
000081 CATTTCATGT GCCTGGAGCA CGGGATGAAG AATTCCTTAG ACTTTGAGTG CCAAGCTAGT GCTTGGACTT TCTTCTAAAG 000160 000161 GTCATGGGTG AGCCCTTGGG GAATGTGGAG ACCACTCCGG CCTGCGATGG AGAAGGAAAT TGTGCCAGAA GCTGGGAAGT 000240 000241 CAAAGTTAAC CCTCCAGGCT AGATCTAGGG AAAGACTTGT CAGCTGTTTC TTCACTTCCA TGACCTTGGA AAATCCGCTG 000320 000321 TCTCCACCAG ACACTGATCC TTGGCACAGC CACTATTTGA TACACTTAAC TCTGCTCAGG ATTTTAGATC TCAACCCAGG 000400 000401 AAATGAGCTA CAGTCTCACC CCAGTGCTTG AAATAGGTGT GCAAACAATT CACATATTAT AAATACGTTG ACTT |
Predicted Small Protein
Name | NONHSAT035116_smProtein_182:430 |
Length | 83 |
Molecular weight | 9416.76 |
Aromaticity | 0.0609756097561 |
Instability index | 66.937804878 |
Isoelectric point | 6.90093994141 |
Runs | 10 |
Runs residual | 0.0139504804139 |
Runs probability | 0.047544603427 |
Amino acid sequence | MWRPLRPAMEKEIVPEAGKSKLTLQARSRERLVSCFFTSMTLENPLSPPDTDPWHSHYLI HLTLLRILDLNPGNELQSHPSA |
Secondary structure | LLLLLLHHHHHHLLLLLLLLEEEEEEHHHHLLLEEEEELLLLLLLLLLLLLLLLLHHHHH HHHHHHHHLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |