NONHSAT036152
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT036152 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2141 nt |
Genomic location |
chr14+:29047214..29070760 |
Exon number |
2 |
Exons |
29047214..29047377,29068784..29070760 |
Genome context |
|
Sequence |
000001 ATTCTGAAAT ATTTCTCTTC CTCTCCACAC AATTCCATCC TGTCTCCCAT GCCAGAGGGC TAGTGGGATA CTTATTTATA 000080
000081 CCGCTGCAGC AGTGCCGTAC TTTAAGATTG CCAAAGAACC AGGCAACGTG AGTATCCAGG TGCACAGAAT CGTCAGGAAT 000160 000161 TGTGataccc cacacccaat cttacattag cctcttgcat ttgtcatgat tagctcatca atattgacat actgttatta 000240 000241 attaaagtgc atactttgtt cagattttct tattttttac ctaatattct ccttctattc caggattcta tcaggatgca 000320 000321 acactgtatt tagtcatcat gactccttca tcacctcctg ctttgacact ttcagaattt cttcatttta gatgaccttg 000400 000401 gcagttttta ggagtgctgg tcaggtattt tgtaaaatgt ttctcatttg ggatttgtct gattttttct cgtgattaga 000480 000481 ctgaagttaa gagtaagaag aagacaacag aggtaaagtg ccattcttat cacatcatat taaggatgca tatgacatca 000560 000561 gggttgtgtt ttgatctgaa ccccttggaa gaggcagtgt ttatcaggtt tttccactat aaagttagta ttttttctgc 000640 000641 ctttccatac tgcattcttt ggaaggaagc catttaatcc aatccataag aaaggaatgt aagcttatgt tccacctcct 000720 000721 tgagagcaga atatcttcat aaattatctg gaatttccta tgcaagagta tatttgtgta ttcttctcca tgaacctatt 000800 000801 tatccagtca tttgtttata tcaggatgag cttataagta tttatttgat actctgggat atgattaaat atgttcatga 000880 000881 ttcttcgaca tgtactggat tttgccattt taagagcttt cggaaggttc aaatgtccct ttgacatacc ccataccctc 000960 000961 attattgggt gagtgatcgt gtatgtatat gggtctttgg atacttcttt aaattttgac accacaagat gctccaggat 001040 001041 tatattatat atttcctgcc caacaaccag tcatttcttc aggaagccat ggttcttttc attggacgac ggttttagaa 001120 001121 acaaggtcta gatcccaaat atgcctgttg ctgctggaat atctttgttt cttggccctc tcagagtaaa agaatatatg 001200 001201 tgtgtatact aaccagtata cacacatata tttataaata tttctatatg tatctatttt tatctatatt gagctaaaca 001280 001281 taatttatac tgatatctcc aactctaatt cattaactac cttataggta agtaatgcat ccatgtttct ccccttgttt 001360 001361 gtttgtcacc tcccacttca aaagtgagaa aactggctct caccttcagc catctattac ttaatttttc agttccagga 001440 001441 ttcatgtata gttggttcaa aatagttaat ccatattccc gtggaaaaca actttatgaa ctagaatata gtcttcatca 001520 001521 gctcatagag tgcttatagg gcttttgcca tcagtcttag tttccattcc tttccaaagt tgcttagagt ggcacctttt 001600 001601 tcccgcagtg ccttttcatt aggtttttca gaaatttgta ataGCCCTCA AATTTCCTAG AGGACCAACA CAAGAAATGT 001680 001681 TTATTCGAGC AATTATATAT CTTGCTTATT TATAAACATG AAATAAACAC CTTCCTAATT CAATAACAGA TTAAAAAATT 001760 001761 CAATACCCAG AAGAATATGT GTGCTTAATT TTATCTTTAA AGGTATAttc tcagaataaa gtaactacat acctaagtac 001840 001841 ttttcttgtt ttaccttact ttctgaacca aagctaaatt tgaatctcaa gcacagtaat tcattctgca gtgtccaata 001920 001921 gtagctatcc cagcttcttt tcattggttt tgatttctct tcgatttAGT AAATCATGTT GTTTATATCC TATTTATTTT 002000 002001 TAAGATGCCT CGGTAATTTT CATGAATTAG CAGCATTAAA AACATAAATA AATAATCTGA ATTATTGAGT CTCCAAAGTT 002080 002081 CTGAACATAC TGAACTCTTC ATGTGTATAT GTATGTAAAA TATGTACTAC ATGAAAACAC T |
Predicted Small Protein
Name | NONHSAT036152_smProtein_545:676 |
Length | 44 |
Molecular weight | 5116.0071 |
Aromaticity | 0.209302325581 |
Instability index | 54.9093023256 |
Isoelectric point | 5.98760986328 |
Runs | 6 |
Runs residual | 0.0177684870656 |
Runs probability | 0.054039333451 |
Amino acid sequence | MHMTSGLCFDLNPLEEAVFIRFFHYKVSIFSAFPYCILWKEAI |
Secondary structure | LLLLLLLLLLLLHHHHHHHHHHHHEEEEEELLLHHHHHHHHHL |
PRMN | LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLL |
PiMo | ooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiii |